DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPAGMPTQQQVPF
Uniprot ID:
Q8N6R0
Source protein:
eEF1A lysine and N-terminal methyltransferase
Source gene:
METTL13
Class:
DEG_ODPH_VHL_1
Location:
361:374
E3 ligase:
VHL
DEGRON score:
0.9734
ASA_SCORE:
57.1071
COIL:
0.7464
CONS_SCORE:
0.3154
DSS_SCORE:
0.4054
HELIX:
0.104
FCONS_SCORE:
0.8888
RIG_SCORE:
0.733
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R357G
SIDM00377
Other Sarcomas
GDSC
LAPAGMPTQQQVPF
DEG_ODPH_VHL_1
0.2222
p.R357G
SKN
soft_tissue
COSMIC
LAPAGMPTQQQVPF
DEG_ODPH_VHL_1
0.2222
p.G365A
SIDM01259
B-Lymphoblastic Leukemia
GDSC
LAPAGMPTQQQVPF
DEG_ODPH_VHL_1
0.6429
p.G365A
GR-ST
haematopoietic_and_lymphoid_tissue
COSMIC
LAPAGMPTQQQVPF
DEG_ODPH_VHL_1
0.6429
p.A362S
SIDM00927
Small Cell Lung Carcinoma
GDSC
LAPAGMPTQQQVPF
DEG_ODPH_VHL_1
0.7588
p.A362S
NCI-H510A
lung
COSMIC
LAPAGMPTQQQVPF
DEG_ODPH_VHL_1
0.7588
p.R384W
SIDM00951
T-Lymphoblastic Leukemia
GDSC
LAPAGMPTQQQVPF
DEG_ODPH_VHL_1
0.0556
p.A367V
639-V
urinary_tract
COSMIC
LAPAGMPTQQQVPF
DEG_ODPH_VHL_1
0.6936
p.H358Q
NTERA-2_cl_D1
testis
COSMIC
LAPAGMPTQQQVPF
DEG_ODPH_VHL_1
0.25
p.P364L
SNU-1040
large_intestine
COSMIC
LAPAGMPTQQQVPF
DEG_ODPH_VHL_1
0.7582
Drug responses associated with METTL13 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPAGMPTQQQVPF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N6R0
eEF1A lysine and N-terminal methyltransferase
DEG_ODPH_VHL_1
361:374
LAPAGMPTQQQVPF
VHL
0.9734
More...