DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPALPSGTAPFLF
Uniprot ID:
Q6ZN01
Source protein:
MEF2-activating motif and SAP domain-containing transcriptional regulator
Source gene:
MAMSTR
Class:
DEG_ODPH_VHL_1
Location:
47:60
E3 ligase:
VHL
DEGRON score:
0.8687
ASA_SCORE:
65.75
COIL:
0.8609
CONS_SCORE:
0.7632
DSS_SCORE:
0.447
HELIX:
0.0678
FCONS_SCORE:
0.9219
RIG_SCORE:
0.6599
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A56V
TCGA-AA-3864
COAD
TCGA
LAPALPSGTAPFLF
DEG_ODPH_VHL_1
0.5825
p.A56V
DO8490
COAD
ICGC
LAPALPSGTAPFLF
DEG_ODPH_VHL_1
0.5825
p.S53A
TCGA-CA-6717
COAD
TCGA
LAPALPSGTAPFLF
DEG_ODPH_VHL_1
0.6477
p.S53A
DO8264
COAD
ICGC
LAPALPSGTAPFLF
DEG_ODPH_VHL_1
0.6477
p.S53L
TCGA-EO-A22T
UCEC
TCGA
LAPALPSGTAPFLF
DEG_ODPH_VHL_1
0.6556
p.K68T
DO222798
COCA
ICGC
LAPALPSGTAPFLF
DEG_ODPH_VHL_1
0.1111
p.E68K
DO234311
ESAD
ICGC
LAPALPSGTAPFLF
DEG_ODPH_VHL_1
0.1111
p.P47H
DO233189
GACA
ICGC
LAPALPSGTAPFLF
DEG_ODPH_VHL_1
0.7694
p.P62T
DO229018
LICA
ICGC
LAPALPSGTAPFLF
DEG_ODPH_VHL_1
0.2778
p.S61R
DO229025
LICA
ICGC
LAPALPSGTAPFLF
DEG_ODPH_VHL_1
0.3056
p.M40I
DO36881
READ
ICGC
LAPALPSGTAPFLF
DEG_ODPH_VHL_1
0.1389
p.V64L
DO229221
THCA
ICGC
LAPALPSGTAPFLF
DEG_ODPH_VHL_1
0.2222
p.P67S
SIDM00587
Biliary Tract Carcinoma
GDSC
LAPALPSGTAPFLF
DEG_ODPH_VHL_1
0.1389
p.L66V
SIDM00949
T-Cell Non-Hodgkin's Lymphoma
GDSC
LAPALPSGTAPFLF
DEG_ODPH_VHL_1
0.1667
Drug responses associated with MAMSTR mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPALPSGTAPFLF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6ZN01
MEF2-activating motif and SAP domain-containing transcriptional regulator
DEG_ODPH_VHL_1
47:60
LAPALPSGTAPFLF
VHL
0.8687
More...