DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPAPALPPEPLFL
Uniprot ID:
Q9UJW9
Source protein:
SERTA domain-containing protein 3
Source gene:
SERTAD3
Class:
DEG_ODPH_VHL_1
Location:
71:84
E3 ligase:
VHL
DEGRON score:
0.98
ASA_SCORE:
81.9643
COIL:
0.8781
CONS_SCORE:
0.9783
DSS_SCORE:
0.365
HELIX:
0.0761
FCONS_SCORE:
1.0162
RIG_SCORE:
0.7335
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P73A
TCGA-90-A4ED
LUSC
TCGA
LAPAPALPPEPLFL
DEG_ODPH_VHL_1
0.7503
p.P73A
DO45482
LUSC
ICGC
LAPAPALPPEPLFL
DEG_ODPH_VHL_1
0.7503
p.E87D
TCGA-EE-A2M8
SKCM
TCGA
LAPAPALPPEPLFL
DEG_ODPH_VHL_1
0.25
p.E87D
DO38075
SKCM
ICGC
LAPAPALPPEPLFL
DEG_ODPH_VHL_1
0.25
p.R70C
TCGA-IH-A3EA
SKCM
TCGA
LAPAPALPPEPLFL
DEG_ODPH_VHL_1
0.3056
p.R70C
DO37667
SKCM
ICGC
LAPAPALPPEPLFL
DEG_ODPH_VHL_1
0.3056
p.L71Q
TCGA-LG-A6GG
LIHC
TCGA
LAPAPALPPEPLFL
DEG_ODPH_VHL_1
0.7765
p.L71Q
DO49699
LIHC
ICGC
LAPAPALPPEPLFL
DEG_ODPH_VHL_1
0.7765
p.P81L
TCGA-OD-A75X
SKCM
TCGA
LAPAPALPPEPLFL
DEG_ODPH_VHL_1
0.6471
p.P81L
DO48601
SKCM
ICGC
LAPAPALPPEPLFL
DEG_ODPH_VHL_1
0.6471
p.L69I
DO228974
LICA
ICGC
LAPAPALPPEPLFL
DEG_ODPH_VHL_1
0.2778
p.S90C
SIDM00557
Neuroblastoma
GDSC
LAPAPALPPEPLFL
DEG_ODPH_VHL_1
0.1667
p.S90C
ACH-000345
Neuroblastoma
CCLE
LAPAPALPPEPLFL
DEG_ODPH_VHL_1
0.1667
p.S90C
KP-N-RT-BM-1
autonomic_ganglia
COSMIC
LAPAPALPPEPLFL
DEG_ODPH_VHL_1
0.1667
p.A72T
SIDM01146
Gastric Carcinoma
GDSC
LAPAPALPPEPLFL
DEG_ODPH_VHL_1
0.7139
p.A72T
ACH-000932
Gastric Cancer
CCLE
LAPAPALPPEPLFL
DEG_ODPH_VHL_1
0.7139
p.A72T
NCI-SNU-1
stomach
COSMIC
LAPAPALPPEPLFL
DEG_ODPH_VHL_1
0.7139
p.A74T
SIDM00220
Ovarian Carcinoma
GDSC
LAPAPALPPEPLFL
DEG_ODPH_VHL_1
0.6028
p.A74T
ACH-000962
Ovarian Cancer
CCLE
LAPAPALPPEPLFL
DEG_ODPH_VHL_1
0.6028
p.A74T
OC-314
ovary
COSMIC
LAPAPALPPEPLFL
DEG_ODPH_VHL_1
0.6028
p.T61P
SUP-HD1
haematopoietic_and_lymphoid_tissue
COSMIC
LAPAPALPPEPLFL
DEG_ODPH_VHL_1
0.0556
Drug responses associated with SERTAD3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPAPALPPEPLFL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UJW9
SERTA domain-containing protein 3
DEG_ODPH_VHL_1
71:84
LAPAPALPPEPLFL
VHL
0.98
More...