DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPAPLAKAPRLPI
Uniprot ID:
Q9UKN7
Source protein:
Unconventional myosin-XV
Source gene:
MYO15A
Class:
DEG_ODPH_VHL_1
Location:
2521:2534
E3 ligase:
VHL
DEGRON score:
0.8036
ASA_SCORE:
97.6286
COIL:
0.941
CONS_SCORE:
0.3006
DSS_SCORE:
0.4692
HELIX:
0.0349
FCONS_SCORE:
1.0311
RIG_SCORE:
0.6994
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V2512M
TCGA-28-1746
GBM
TCGA
LAPAPLAKAPRLPI
DEG_ODPH_VHL_1
0.0833
p.V2512M
TCGA-IB-7651
PAAD
TCGA
LAPAPLAKAPRLPI
DEG_ODPH_VHL_1
0.0833
p.V2512M
DO13564
GBM
ICGC
LAPAPLAKAPRLPI
DEG_ODPH_VHL_1
0.0833
p.V2512M
DO46657
PAAD
ICGC
LAPAPLAKAPRLPI
DEG_ODPH_VHL_1
0.0833
p.V2512M
SIDM01617
Endometrial Carcinoma
GDSC
LAPAPLAKAPRLPI
DEG_ODPH_VHL_1
0.0833
p.A2527T
TCGA-AP-A0LM
UCEC
TCGA
LAPAPLAKAPRLPI
DEG_ODPH_VHL_1
0.6028
p.A2527T
DO43306
UCEC
ICGC
LAPAPLAKAPRLPI
DEG_ODPH_VHL_1
0.6028
p.R2515H
TCGA-B5-A3FC
UCEC
TCGA
LAPAPLAKAPRLPI
DEG_ODPH_VHL_1
0.1667
p.R2515H
DO41871
UCEC
ICGC
LAPAPLAKAPRLPI
DEG_ODPH_VHL_1
0.1667
p.R2515H
SIDM00437
Acute Myeloid Leukemia
GDSC
LAPAPLAKAPRLPI
DEG_ODPH_VHL_1
0.1667
p.R2515H
ACH-000362
Leukemia
CCLE
LAPAPLAKAPRLPI
DEG_ODPH_VHL_1
0.1667
p.R2515H
MOLM-13
haematopoietic_and_lymphoid_tissue
COSMIC
LAPAPLAKAPRLPI
DEG_ODPH_VHL_1
0.1667
p.A2538V
TCGA-HU-A4GN
STAD
TCGA
LAPAPLAKAPRLPI
DEG_ODPH_VHL_1
0.2222
p.A2538V
DO47833
STAD
ICGC
LAPAPLAKAPRLPI
DEG_ODPH_VHL_1
0.2222
p.L2513I
DO230335
COCA
ICGC
LAPAPLAKAPRLPI
DEG_ODPH_VHL_1
0.1111
p.A2529D
SIDM01137
Pancreatic Carcinoma
GDSC
LAPAPLAKAPRLPI
DEG_ODPH_VHL_1
0.6682
p.A2529D
ACH-000235
Pancreatic Cancer
CCLE
LAPAPLAKAPRLPI
DEG_ODPH_VHL_1
0.6682
p.A2529D
PANC-04-03
pancreas
COSMIC
LAPAPLAKAPRLPI
DEG_ODPH_VHL_1
0.6682
p.A2516V
SIDM01394
Kidney Carcinoma
GDSC
LAPAPLAKAPRLPI
DEG_ODPH_VHL_1
0.1944
Drug responses associated with MYO15A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPAPLAKAPRLPI
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UKN7
Unconventional myosin-XV
DEG_ODPH_VHL_1
2521:2534
LAPAPLAKAPRLPI
VHL
0.8036
More...