DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPDRATGRPWLPL
Uniprot ID:
Q6V0I7
Source protein:
Protocadherin Fat 4
Source gene:
FAT4
Class:
DEG_ODPH_VHL_1
Location:
3:16
E3 ligase:
VHL
DEGRON score:
0.7502
ASA_SCORE:
78.45
COIL:
0.8087
CONS_SCORE:
0.2991
DSS_SCORE:
0.3297
HELIX:
0.0546
FCONS_SCORE:
1.0412
RIG_SCORE:
0.7603
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L3V
TCGA-AA-3949
COAD
TCGA
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.6765
p.L3V
TCGA-BR-6453
STAD
TCGA
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.6765
p.L3V
TCGA-DM-A28F
COAD
TCGA
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.6765
p.L3V
DO7798
COAD
ICGC
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.6765
p.L3V
DO9828
COAD
ICGC
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.6765
p.L3V
DO227995
COCA
ICGC
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.6765
p.L3V
DO234463
ESAD
ICGC
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.6765
p.L3V
DO38543
STAD
ICGC
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.6765
p.T4P
DO223732
CESC
ICGC
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.8142
p.L24F
DO234218
ESAD
ICGC
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.1111
p.R11L
DO233707
GACA
ICGC
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.7316
p.A18S
DO228971
LICA
ICGC
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.2778
p.T4M
DO27791
MALY
ICGC
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.8534
p.P15S
DO220902
MELA
ICGC
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.5641
p.P5T
DO27901
ORCA
ICGC
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.7031
p.H17R
DO46518
OV
ICGC
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.3056
p.A19G
DO28102
OV
ICGC
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.25
p.V2I
DO37418
SKCM
ICGC
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.3056
p.V5I
DO37406
SKCM
ICGC
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.7076
p.F22V
DO41331
UCEC
ICGC
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.1667
p.A4T
SIDM00506
Small Cell Lung Carcinoma
GDSC
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.7139
p.A4T
ACH-000508
Lung Cancer
CCLE
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.7139
p.A4T
COR-L88
lung
COSMIC
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.7139
p.R26Q
SIDM00118
Colorectal Carcinoma
GDSC
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.0556
p.R26Q
ACH-001081
Colon/Colorectal Cancer
CCLE
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.0556
p.R26Q
HCC2998
large_intestine
COSMIC
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.0556
p.L19I
SIDM01588
Endometrial Carcinoma
GDSC
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.25
p.L19I
ACH-000993
Endometrial/Uterine Cancer
CCLE
LAPDRATGRPWLPL
DEG_ODPH_VHL_1
0.25
Drug responses associated with FAT4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPDRATGRPWLPL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6V0I7
Protocadherin Fat 4
DEG_ODPH_VHL_1
3:16
LAPDRATGRPWLPL
VHL
0.7502
More...