DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPEDPPVPFRM
Uniprot ID:
Q9UFG5
Source protein:
UPF0449 protein C19orf25
Source gene:
C19orf25
Class:
DEG_ODPH_VHL_1
Location:
40:51
E3 ligase:
VHL
DEGRON score:
0.891
ASA_SCORE:
83.1167
COIL:
0.7976
CONS_SCORE:
0.4483
DSS_SCORE:
0.5555
HELIX:
0.1033
FCONS_SCORE:
0.7396
RIG_SCORE:
0.7376
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G59R
DO1301
BRCA
ICGC
LAPEDPPVPFRM
DEG_ODPH_VHL_1
0.1111
p.E56D
DO233905
GACA
ICGC
LAPEDPPVPFRM
DEG_ODPH_VHL_1
0.1944
p.T38N
DO228978
LICA
ICGC
LAPEDPPVPFRM
DEG_ODPH_VHL_1
0.2778
p.R61K
DO23584
LUAD
ICGC
LAPEDPPVPFRM
DEG_ODPH_VHL_1
0.0556
p.P58L
DO37432
SKCM
ICGC
LAPEDPPVPFRM
DEG_ODPH_VHL_1
0.1389
p.G59E
SIDM00217
Colorectal Carcinoma
GDSC
LAPEDPPVPFRM
DEG_ODPH_VHL_1
0.1111
p.G59E
ACH-000999
Colon/Colorectal Cancer
CCLE
LAPEDPPVPFRM
DEG_ODPH_VHL_1
0.1111
p.R50S
SIDM00145
T-Lymphoblastic Leukemia
GDSC
LAPEDPPVPFRM
DEG_ODPH_VHL_1
0.6316
p.R50M
SIDM00145
T-Lymphoblastic Leukemia
GDSC
LAPEDPPVPFRM
DEG_ODPH_VHL_1
0.7521
p.P48S
ACH-000409
Ovarian Cancer
CCLE
LAPEDPPVPFRM
DEG_ODPH_VHL_1
0.5641
p.S47T
ACH-000800
Lung Cancer
CCLE
LAPEDPPVPFRM
DEG_ODPH_VHL_1
0.7116
p.S46I
ACH-000996
Endometrial/Uterine Cancer
CCLE
LAPEDPPVPFRM
DEG_ODPH_VHL_1
0.7341
Drug responses associated with C19orf25 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPEDPPVPFRM
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UFG5
UPF0449 protein C19orf25
DEG_ODPH_VHL_1
40:51
LAPEDPPVPFRM
VHL
0.891
More...