DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPEEVNKAPVFV
Uniprot ID:
A6H8Y1
Source protein:
Transcription factor TFIIIB component B'' homolog
Source gene:
BDP1
Class:
DEG_ODPH_VHL_1
Location:
1892:1904
E3 ligase:
VHL
DEGRON score:
0.8168
ASA_SCORE:
88.0462
COIL:
0.6775
CONS_SCORE:
0.5932
DSS_SCORE:
0.4542
HELIX:
0.2392
FCONS_SCORE:
1.0595
RIG_SCORE:
0.7289
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E1895K
TCGA-06-5416
GBM
TCGA
LAPEEVNKAPVFV
DEG_ODPH_VHL_1
0.591
p.E1912A
TCGA-BR-4191
STAD
TCGA
LAPEEVNKAPVFV
DEG_ODPH_VHL_1
0.1111
p.D1884G
SIDM01775
B-Cell Non-Hodgkin's Lymphoma
GDSC
LAPEEVNKAPVFV
DEG_ODPH_VHL_1
0.1111
Drug responses associated with BDP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPEEVNKAPVFV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6H8Y1
Transcription factor TFIIIB component B'' homolog
DEG_ODPH_VHL_1
1892:1904
LAPEEVNKAPVFV
VHL
0.8168
More...