DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPFQD
Uniprot ID:
Q92738
Source protein:
USP6 N-terminal-like protein
Source gene:
USP6NL
Class:
LIG_APCC_ABBA_1
Location:
769:774
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9897
ASA_SCORE:
79.3667
COIL:
0.7477
CONS_SCORE:
0.2256
DSS_SCORE:
0.3568
HELIX:
0.1692
FCONS_SCORE:
0.9057
RIG_SCORE:
0.7367
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S774N
TCGA-34-5239
LUSC
TCGA
LAPFQD
LIG_APCC_ABBA_1
0.7069
p.S774G
TCGA-AP-A056
UCEC
TCGA
LAPFQD
LIG_APCC_ABBA_1
0.6993
p.QG765QR
DO222662
MELA
ICGC
LAPFQD
LIG_APCC_ABBA_1
0.4444
p.D772Y
SIDM00946
T-Lymphoblastic Leukemia
GDSC
LAPFQD
LIG_APCC_ABBA_1
0.7325
p.D772Y
DND-41
haematopoietic_and_lymphoid_tissue
COSMIC
LAPFQD
LIG_APCC_ABBA_1
0.7325
p.T764M
SIDM00329
Hodgkin's Lymphoma
GDSC
LAPFQD
LIG_APCC_ABBA_1
0.6389
p.T764M
SIDM01106
Melanoma
GDSC
LAPFQD
LIG_APCC_ABBA_1
0.6389
p.T764M
SIDM00758
Non-Small Cell Lung Carcinoma
GDSC
LAPFQD
LIG_APCC_ABBA_1
0.6389
p.T764M
SIDM00757
Non-Small Cell Lung Carcinoma
GDSC
LAPFQD
LIG_APCC_ABBA_1
0.6389
p.R761K
SIDM01735
Biliary Tract Carcinoma
GDSC
LAPFQD
LIG_APCC_ABBA_1
0.1111
p.G759D
ACH-000977
lymph_node
CCLE
LAPFQD
LIG_APCC_ABBA_1
0.0556
p.G759D
ACH-000986
Colon/Colorectal Cancer
CCLE
LAPFQD
LIG_APCC_ABBA_1
0.0556
p.G759D
HT-115
large_intestine
COSMIC
LAPFQD
LIG_APCC_ABBA_1
0.0556
p.G759D
LNCaP-Clone-FGC
prostate
COSMIC
LAPFQD
LIG_APCC_ABBA_1
0.0556
Drug responses associated with USP6NL mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPFQD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q92738
USP6 N-terminal-like protein
LIG_APCC_ABBA_1
769:774
LAPFQD
APC,CDC20,FZR1
0.9897
More...