DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPGEFDPNIDV
Uniprot ID:
P48426
Source protein:
Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha
Source gene:
PIP4K2A
Class:
DEG_ODPH_VHL_1
Location:
327:338
E3 ligase:
VHL
DEGRON score:
0.8782
ASA_SCORE:
54.85
COIL:
0.7909
CONS_SCORE:
0.3652
DSS_SCORE:
0.4781
HELIX:
0.0962
FCONS_SCORE:
1.0436
RIG_SCORE:
0.7044
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K342N
TCGA-22-4613
LUSC
TCGA
LAPGEFDPNIDV
DEG_ODPH_VHL_1
0.3333
p.K342N
DO26468
LUSC
ICGC
LAPGEFDPNIDV
DEG_ODPH_VHL_1
0.3333
p.D337N
TCGA-D1-A16X
UCEC
TCGA
LAPGEFDPNIDV
DEG_ODPH_VHL_1
0.5821
p.D337N
DO41799
UCEC
ICGC
LAPGEFDPNIDV
DEG_ODPH_VHL_1
0.5821
p.T347K
DO229029
LICA
ICGC
LAPGEFDPNIDV
DEG_ODPH_VHL_1
0.0833
p.T328N
DO229045
LICA
ICGC
LAPGEFDPNIDV
DEG_ODPH_VHL_1
0.7055
p.V318I
DO220875
MELA
ICGC
LAPGEFDPNIDV
DEG_ODPH_VHL_1
0.0833
p.I342N
DO30490
OV
ICGC
LAPGEFDPNIDV
DEG_ODPH_VHL_1
0.3333
p.F341L
DO41488
UCEC
ICGC
LAPGEFDPNIDV
DEG_ODPH_VHL_1
0.25
p.V338I
SIDM01943
Colorectal Carcinoma
GDSC
LAPGEFDPNIDV
DEG_ODPH_VHL_1
0.5965
p.P325S
SIDM00190
Melanoma
GDSC
LAPGEFDPNIDV
DEG_ODPH_VHL_1
0.2778
p.P325S
ACH-002097
Skin Cancer
CCLE
LAPGEFDPNIDV
DEG_ODPH_VHL_1
0.2778
p.P325S
CP66-MEL
skin
COSMIC
LAPGEFDPNIDV
DEG_ODPH_VHL_1
0.2778
p.S323R
SIDM00771
Non-Small Cell Lung Carcinoma
GDSC
LAPGEFDPNIDV
DEG_ODPH_VHL_1
0.2222
p.S323R
ACH-000496
Lung Cancer
CCLE
LAPGEFDPNIDV
DEG_ODPH_VHL_1
0.2222
p.S323R
NCI-H1792
lung
COSMIC
LAPGEFDPNIDV
DEG_ODPH_VHL_1
0.2222
p.G330R
SIDM01134
Small Cell Lung Carcinoma
GDSC
LAPGEFDPNIDV
DEG_ODPH_VHL_1
0.6457
p.G330R
ACH-000292
Lung Cancer
CCLE
LAPGEFDPNIDV
DEG_ODPH_VHL_1
0.6457
p.G330R
NCI-H841
lung
COSMIC
LAPGEFDPNIDV
DEG_ODPH_VHL_1
0.6457
p.L327M
SIDM00309
Mesothelioma
GDSC
LAPGEFDPNIDV
DEG_ODPH_VHL_1
0.711
p.L327M
SIDM00793
Burkitt's Lymphoma
GDSC
LAPGEFDPNIDV
DEG_ODPH_VHL_1
0.711
p.A324T
REH
haematopoietic_and_lymphoid_tissue
COSMIC
LAPGEFDPNIDV
DEG_ODPH_VHL_1
0.25
p.N346T
SK-MEL-1
skin
COSMIC
LAPGEFDPNIDV
DEG_ODPH_VHL_1
0.1111
Drug responses associated with PIP4K2A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPGEFDPNIDV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P48426
Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha
DEG_ODPH_VHL_1
327:338
LAPGEFDPNIDV
VHL
0.8782
More...