DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPGEPEGPSLLV
Uniprot ID:
Q96DN6
Source protein:
Methyl-CpG-binding domain protein 6
Source gene:
MBD6
Class:
DEG_ODPH_VHL_1
Location:
587:599
E3 ligase:
VHL
DEGRON score:
0.5785
ASA_SCORE:
89.6
COIL:
0.949
CONS_SCORE:
0.4129
DSS_SCORE:
0.6981
HELIX:
0.0274
FCONS_SCORE:
0.9642
RIG_SCORE:
0.565
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P589T
TCGA-DA-A1I1
SKCM
TCGA
LAPGEPEGPSLLV
DEG_ODPH_VHL_1
0.7031
p.P589T
DO37966
SKCM
ICGC
LAPGEPEGPSLLV
DEG_ODPH_VHL_1
0.7031
p.P592T
TCGA-FI-A2F4
UCEC
TCGA
LAPGEPEGPSLLV
DEG_ODPH_VHL_1
0.5919
p.P592T
DO43434
UCEC
ICGC
LAPGEPEGPSLLV
DEG_ODPH_VHL_1
0.5919
p.P589L
DO27817
MALY
ICGC
LAPGEPEGPSLLV
DEG_ODPH_VHL_1
0.7582
Drug responses associated with MBD6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPGEPEGPSLLV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96DN6
Methyl-CpG-binding domain protein 6
DEG_ODPH_VHL_1
587:599
LAPGEPEGPSLLV
VHL
0.5785
More...