DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPGPHQVPLDL
Uniprot ID:
Q9UHF5
Source protein:
Interleukin-17B
Source gene:
IL17B
Class:
DEG_ODPH_VHL_1
Location:
38:49
E3 ligase:
VHL
DEGRON score:
0.9822
ASA_SCORE:
70.0083
COIL:
0.7528
CONS_SCORE:
0.5647
DSS_SCORE:
0.6473
HELIX:
0.2117
FCONS_SCORE:
1.031
RIG_SCORE:
0.6378
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R34W
TCGA-A2-A0D3
BRCA
TCGA
LAPGPHQVPLDL
DEG_ODPH_VHL_1
0.2222
p.R34W
TCGA-B6-A0I8
BRCA
TCGA
LAPGPHQVPLDL
DEG_ODPH_VHL_1
0.2222
p.R34W
DO3488
BRCA
ICGC
LAPGPHQVPLDL
DEG_ODPH_VHL_1
0.2222
p.R34W
DO2149
BRCA
ICGC
LAPGPHQVPLDL
DEG_ODPH_VHL_1
0.2222
p.R34W
SIDM01966
Colorectal Carcinoma
GDSC
LAPGPHQVPLDL
DEG_ODPH_VHL_1
0.2222
p.K30N
TCGA-BF-A1PU
SKCM
TCGA
LAPGPHQVPLDL
DEG_ODPH_VHL_1
0.2222
p.K30N
DO50278
SKCM
ICGC
LAPGPHQVPLDL
DEG_ODPH_VHL_1
0.2222
p.K30N
SIDM00846
Cervical Carcinoma
GDSC
LAPGPHQVPLDL
DEG_ODPH_VHL_1
0.2222
p.K30N
ACH-001086
Cervical Cancer
CCLE
LAPGPHQVPLDL
DEG_ODPH_VHL_1
0.2222
p.K30N
HeLa
cervix
COSMIC
LAPGPHQVPLDL
DEG_ODPH_VHL_1
0.2222
p.P40T
TCGA-CD-A4MG
STAD
TCGA
LAPGPHQVPLDL
DEG_ODPH_VHL_1
0.7031
p.P40T
DO48009
STAD
ICGC
LAPGPHQVPLDL
DEG_ODPH_VHL_1
0.7031
p.R58H
TCGA-DU-6392
LGG
TCGA
LAPGPHQVPLDL
DEG_ODPH_VHL_1
0.0833
p.R58H
DO227549
COCA
ICGC
LAPGPHQVPLDL
DEG_ODPH_VHL_1
0.0833
p.R58H
DO22237
LGG
ICGC
LAPGPHQVPLDL
DEG_ODPH_VHL_1
0.0833
p.R52W
TCGA-UZ-A9Q1
KIRP
TCGA
LAPGPHQVPLDL
DEG_ODPH_VHL_1
0.25
p.R52W
DO219716
KIRP
ICGC
LAPGPHQVPLDL
DEG_ODPH_VHL_1
0.25
p.R29K
DO222557
MELA
ICGC
LAPGPHQVPLDL
DEG_ODPH_VHL_1
0.0833
p.R52G
SIDM00734
Non-Small Cell Lung Carcinoma
GDSC
LAPGPHQVPLDL
DEG_ODPH_VHL_1
0.25
p.R52G
ACH-000589
Lung Cancer
CCLE
LAPGPHQVPLDL
DEG_ODPH_VHL_1
0.25
p.R52G
NCI-H1437
lung
COSMIC
LAPGPHQVPLDL
DEG_ODPH_VHL_1
0.25
p.P46Q
ACH-001369
Ovarian Cancer
CCLE
LAPGPHQVPLDL
DEG_ODPH_VHL_1
0.5924
Drug responses associated with IL17B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPGPHQVPLDL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UHF5
Interleukin-17B
DEG_ODPH_VHL_1
38:49
LAPGPHQVPLDL
VHL
0.9822
More...