DegronMD: protein-targeted degradation, mutation and drug response to degrons
Home
(current)
Browse
Proteins/Degrons
Mutations
Drug response
Network-rewiring
Drug resistance
Search
Tutorial
Download
Contact
Links
BSML
CPH
CGC
Degron:
LAPGPTPRAFGL
Uniprot ID:
Q6X4W1
Source protein:
NMDA receptor synaptonuclear signaling and neuronal migration factor
Source gene:
NSMF
Class:
DEG_ODPH_VHL_1
Location:
173:184
E3 ligase:
VHL
DEGRON score:
0.9109
ASA_SCORE:
83.1417
COIL:
0.9047
CONS_SCORE:
0.442
DSS_SCORE:
0.6061
HELIX:
0.0621
FCONS_SCORE:
1.0515
RIG_SCORE:
0.6365
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A174V
TCGA-22-4599
LUSC
TCGA
LAPGPTPRAFGL
DEG_ODPH_VHL_1
0.6936
p.A174V
DO26945
LUSC
ICGC
LAPGPTPRAFGL
DEG_ODPH_VHL_1
0.6936
p.P177T
TCGA-56-8626
LUSC
TCGA
LAPGPTPRAFGL
DEG_ODPH_VHL_1
0.5919
p.P177T
DO45506
LUSC
ICGC
LAPGPTPRAFGL
DEG_ODPH_VHL_1
0.5919
p.P179H
TCGA-AP-A059
UCEC
TCGA
LAPGPTPRAFGL
DEG_ODPH_VHL_1
0.6583
p.P179H
DO41361
UCEC
ICGC
LAPGPTPRAFGL
DEG_ODPH_VHL_1
0.6583
p.R180W
TCGA-AP-A1DV
UCEC
TCGA
LAPGPTPRAFGL
DEG_ODPH_VHL_1
0.7523
p.R180W
DO43186
UCEC
ICGC
LAPGPTPRAFGL
DEG_ODPH_VHL_1
0.7523
p.R180G
TCGA-FD-A6TC
BLCA
TCGA
LAPGPTPRAFGL
DEG_ODPH_VHL_1
0.6457
p.R180G
DO49755
BLCA
ICGC
LAPGPTPRAFGL
DEG_ODPH_VHL_1
0.6457
p.N193H
DO223831
KIRC
ICGC
LAPGPTPRAFGL
DEG_ODPH_VHL_1
0.0833
p.A179T
DO219357
PRAD
ICGC
LAPGPTPRAFGL
DEG_ODPH_VHL_1
0.7139
p.R163C
DO48665
SKCM
ICGC
LAPGPTPRAFGL
DEG_ODPH_VHL_1
0.0556
p.E182K
DO38495
STAD
ICGC
LAPGPTPRAFGL
DEG_ODPH_VHL_1
0.7022
p.E182K
DO43907
UCEC
ICGC
LAPGPTPRAFGL
DEG_ODPH_VHL_1
0.7022
p.P171T
DO223282
UCEC
ICGC
LAPGPTPRAFGL
DEG_ODPH_VHL_1
0.2778
Drug responses associated with NSMF mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPGPTPRAFGL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6X4W1
NMDA receptor synaptonuclear signaling and neuronal migration factor
DEG_ODPH_VHL_1
173:184
LAPGPTPRAFGL
VHL
0.9109
More...