DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPGQSGMDDMKL
Uniprot ID:
Q9HCS7
Source protein:
Pre-mRNA-splicing factor SYF1
Source gene:
XAB2
Class:
DEG_ODPH_VHL_1
Location:
759:771
E3 ligase:
VHL
DEGRON score:
0.9781
ASA_SCORE:
78.3231
COIL:
0.612
CONS_SCORE:
0.2736
DSS_SCORE:
0.5571
HELIX:
0.3656
FCONS_SCORE:
1.1178
RIG_SCORE:
0.6932
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q763H
TCGA-55-8205
LUAD
TCGA
LAPGQSGMDDMKL
DEG_ODPH_VHL_1
0.647
p.R775L
TCGA-D3-A2JO
SKCM
TCGA
LAPGQSGMDDMKL
DEG_ODPH_VHL_1
0.2222
p.G762W
TCGA-EE-A2MG
SKCM
TCGA
LAPGQSGMDDMKL
DEG_ODPH_VHL_1
0.6714
p.G762W
SIDM00333
Endometrial Carcinoma
GDSC
LAPGQSGMDDMKL
DEG_ODPH_VHL_1
0.6714
p.G762W
ACH-000988
Endometrial/Uterine Cancer
CCLE
LAPGQSGMDDMKL
DEG_ODPH_VHL_1
0.6714
p.G762W
MFE-319
endometrium
COSMIC
LAPGQSGMDDMKL
DEG_ODPH_VHL_1
0.6714
p.Q774P
TCGA-KK-A7B0
PRAD
TCGA
LAPGQSGMDDMKL
DEG_ODPH_VHL_1
0.25
p.E779K
DO584
BLCA
ICGC
LAPGQSGMDDMKL
DEG_ODPH_VHL_1
0.1111
p.E779K
DO558
BLCA
ICGC
LAPGQSGMDDMKL
DEG_ODPH_VHL_1
0.1111
p.M769T
DO230326
COCA
ICGC
LAPGQSGMDDMKL
DEG_ODPH_VHL_1
0.7423
p.D767N
DO222755
COCA
ICGC
LAPGQSGMDDMKL
DEG_ODPH_VHL_1
0.5821
p.Q760H
DO48884
LUAD
ICGC
LAPGQSGMDDMKL
DEG_ODPH_VHL_1
0.7582
p.Q771P
DO219307
PRAD
ICGC
LAPGQSGMDDMKL
DEG_ODPH_VHL_1
0.7035
p.G759W
DO37421
SKCM
ICGC
LAPGQSGMDDMKL
DEG_ODPH_VHL_1
0.7825
p.R772L
DO47619
SKCM
ICGC
LAPGQSGMDDMKL
DEG_ODPH_VHL_1
0.3056
p.M766T
SIDM02021
Esophageal Carcinoma
GDSC
LAPGQSGMDDMKL
DEG_ODPH_VHL_1
0.6312
p.A760D
SIDM00949
T-Cell Non-Hodgkin's Lymphoma
GDSC
LAPGQSGMDDMKL
DEG_ODPH_VHL_1
0.7793
p.A760D
ACH-000233
Lymphoma
CCLE
LAPGQSGMDDMKL
DEG_ODPH_VHL_1
0.7793
p.A760D
DEL
haematopoietic_and_lymphoid_tissue
COSMIC
LAPGQSGMDDMKL
DEG_ODPH_VHL_1
0.7793
Drug responses associated with XAB2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPGQSGMDDMKL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9HCS7
Pre-mRNA-splicing factor SYF1
DEG_ODPH_VHL_1
759:771
LAPGQSGMDDMKL
VHL
0.9781
More...