DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPGTLPKPSVKF
Uniprot ID:
Q5JPI3
Source protein:
Uncharacterized protein C3orf38
Source gene:
C3orf38
Class:
DEG_ODPH_VHL_1
Location:
281:293
E3 ligase:
VHL
DEGRON score:
0.8682
ASA_SCORE:
79.3385
COIL:
0.8303
CONS_SCORE:
0.3181
DSS_SCORE:
0.289
HELIX:
0.0233
FCONS_SCORE:
0.7659
RIG_SCORE:
0.7348
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V291A
TCGA-06-5416
GBM
TCGA
LAPGTLPKPSVKF
DEG_ODPH_VHL_1
0.6936
p.V291A
DO10880
GBM
ICGC
LAPGTLPKPSVKF
DEG_ODPH_VHL_1
0.6936
p.E294V
TCGA-55-A492
LUAD
TCGA
LAPGTLPKPSVKF
DEG_ODPH_VHL_1
0.3056
p.E294V
DO44726
LICA
ICGC
LAPGTLPKPSVKF
DEG_ODPH_VHL_1
0.3056
p.E294V
DO23708
LUAD
ICGC
LAPGTLPKPSVKF
DEG_ODPH_VHL_1
0.3056
p.P289S
TCGA-D9-A6EC
SKCM
TCGA
LAPGTLPKPSVKF
DEG_ODPH_VHL_1
0.5641
p.P289S
DO50291
SKCM
ICGC
LAPGTLPKPSVKF
DEG_ODPH_VHL_1
0.5641
p.P289S
SIDM00759
Non-Small Cell Lung Carcinoma
GDSC
LAPGTLPKPSVKF
DEG_ODPH_VHL_1
0.5641
p.P289S
SIDM00202
Ewing's Sarcoma
GDSC
LAPGTLPKPSVKF
DEG_ODPH_VHL_1
0.5641
p.P289S
SIDM00327
Hodgkin's Lymphoma
GDSC
LAPGTLPKPSVKF
DEG_ODPH_VHL_1
0.5641
p.P289L
TCGA-D9-A6EC
SKCM
TCGA
LAPGTLPKPSVKF
DEG_ODPH_VHL_1
0.6471
p.P289L
DO50291
SKCM
ICGC
LAPGTLPKPSVKF
DEG_ODPH_VHL_1
0.6471
p.L281I
TCGA-EE-A2GT
SKCM
TCGA
LAPGTLPKPSVKF
DEG_ODPH_VHL_1
0.6063
p.L281I
DO37946
SKCM
ICGC
LAPGTLPKPSVKF
DEG_ODPH_VHL_1
0.6063
p.S280F
TCGA-FS-A4F0
SKCM
TCGA
LAPGTLPKPSVKF
DEG_ODPH_VHL_1
0.3056
p.S280F
DO37891
SKCM
ICGC
LAPGTLPKPSVKF
DEG_ODPH_VHL_1
0.3056
p.P289A
SIDM00451
T-Lymphoblastic Leukemia
GDSC
LAPGTLPKPSVKF
DEG_ODPH_VHL_1
0.6392
p.P289A
ACH-000937
Leukemia
CCLE
LAPGTLPKPSVKF
DEG_ODPH_VHL_1
0.6392
Drug responses associated with C3orf38 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPGTLPKPSVKF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5JPI3
Uncharacterized protein C3orf38
DEG_ODPH_VHL_1
281:293
LAPGTLPKPSVKF
VHL
0.8682
More...