DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPGVPETSHHLDV
Uniprot ID:
Q6ZRC1
Source protein:
Uncharacterized protein C4orf50
Source gene:
C4orf50
Class:
DEG_ODPH_VHL_1
Location:
130:143
E3 ligase:
VHL
DEGRON score:
0.9214
ASA_SCORE:
73.6929
COIL:
0.7887
CONS_SCORE:
0.7595
DSS_SCORE:
0.3297
HELIX:
0.1556
FCONS_SCORE:
1.0366
RIG_SCORE:
0.7258
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N149K
DO52708
CLLE
ICGC
LAPGVPETSHHLDV
DEG_ODPH_VHL_1
0.1667
p.G123R
DO50970
LICA
ICGC
LAPGVPETSHHLDV
DEG_ODPH_VHL_1
0.1389
p.S147N
DO50970
LICA
ICGC
LAPGVPETSHHLDV
DEG_ODPH_VHL_1
0.2222
p.S131N
DO232761
PBCA
ICGC
LAPGVPETSHHLDV
DEG_ODPH_VHL_1
0.7069
p.N136S
DO218848
SKCA
ICGC
LAPGVPETSHHLDV
DEG_ODPH_VHL_1
0.7069
Drug responses associated with C4orf50 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPGVPETSHHLDV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6ZRC1
Uncharacterized protein C4orf50
DEG_ODPH_VHL_1
130:143
LAPGVPETSHHLDV
VHL
0.9214
More...