DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPIGQPFYNSLGF
Uniprot ID:
Q8TB72
Source protein:
Pumilio homolog 2
Source gene:
PUM2
Class:
DEG_ODPH_VHL_1
Location:
602:615
E3 ligase:
VHL
DEGRON score:
0.9919
ASA_SCORE:
44.5429
COIL:
0.882
CONS_SCORE:
0.2905
DSS_SCORE:
0.402
HELIX:
0.0566
FCONS_SCORE:
1.0169
RIG_SCORE:
0.6643
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P619A
TCGA-DK-AA74
BLCA
TCGA
LAPIGQPFYNSLGF
DEG_ODPH_VHL_1
0.2222
p.P619A
DO219011
BLCA
ICGC
LAPIGQPFYNSLGF
DEG_ODPH_VHL_1
0.2222
p.S592Y
DO229037
LICA
ICGC
LAPIGQPFYNSLGF
DEG_ODPH_VHL_1
0.5
p.G612A
DO218280
ORCA
ICGC
LAPIGQPFYNSLGF
DEG_ODPH_VHL_1
0.754
p.G606R
SIDM00254
Neuroblastoma
GDSC
LAPIGQPFYNSLGF
DEG_ODPH_VHL_1
0.6457
p.G606R
ACH-002283
Neuroblastoma
CCLE
LAPIGQPFYNSLGF
DEG_ODPH_VHL_1
0.6457
p.G606R
NB5
autonomic_ganglia
COSMIC
LAPIGQPFYNSLGF
DEG_ODPH_VHL_1
0.6457
p.E598D
AMO-1
haematopoietic_and_lymphoid_tissue
COSMIC
LAPIGQPFYNSLGF
DEG_ODPH_VHL_1
0.2222
Drug responses associated with PUM2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPIGQPFYNSLGF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TB72
Pumilio homolog 2
DEG_ODPH_VHL_1
602:615
LAPIGQPFYNSLGF
VHL
0.9919
More...