DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPIVPLNPGDLTF
Uniprot ID:
Q93074
Source protein:
Mediator of RNA polymerase II transcription subunit 12
Source gene:
MED12
Class:
DEG_ODPH_VHL_1
Location:
793:806
E3 ligase:
VHL
DEGRON score:
0.9901
ASA_SCORE:
65.3571
COIL:
0.7324
CONS_SCORE:
0.1563
DSS_SCORE:
0.4733
HELIX:
0.0766
FCONS_SCORE:
0.4267
RIG_SCORE:
0.7571
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L807V
TCGA-55-7281
LUAD
TCGA
LAPIVPLNPGDLTF
DEG_ODPH_VHL_1
0.3056
p.L807V
DO25985
LUAD
ICGC
LAPIVPLNPGDLTF
DEG_ODPH_VHL_1
0.3056
p.R815L
TCGA-55-7907
LUAD
TCGA
LAPIVPLNPGDLTF
DEG_ODPH_VHL_1
0.0833
p.R815L
DO25396
LUAD
ICGC
LAPIVPLNPGDLTF
DEG_ODPH_VHL_1
0.0833
p.L799R
TCGA-85-8582
LUSC
TCGA
LAPIVPLNPGDLTF
DEG_ODPH_VHL_1
0.7316
p.L799R
DO45491
LUSC
ICGC
LAPIVPLNPGDLTF
DEG_ODPH_VHL_1
0.7316
p.G809E
TCGA-AP-A1DK
UCEC
TCGA
LAPIVPLNPGDLTF
DEG_ODPH_VHL_1
0.25
p.G809E
DO42033
UCEC
ICGC
LAPIVPLNPGDLTF
DEG_ODPH_VHL_1
0.25
p.R815W
TCGA-AP-A1DV
UCEC
TCGA
LAPIVPLNPGDLTF
DEG_ODPH_VHL_1
0.0833
p.R815W
TCGA-B5-A3FC
UCEC
TCGA
LAPIVPLNPGDLTF
DEG_ODPH_VHL_1
0.0833
p.R815W
DO43186
UCEC
ICGC
LAPIVPLNPGDLTF
DEG_ODPH_VHL_1
0.0833
p.R815W
DO41871
UCEC
ICGC
LAPIVPLNPGDLTF
DEG_ODPH_VHL_1
0.0833
p.D811N
TCGA-B4-5836
KIRC
TCGA
LAPIVPLNPGDLTF
DEG_ODPH_VHL_1
0.1944
p.D811N
DO17878
KIRC
ICGC
LAPIVPLNPGDLTF
DEG_ODPH_VHL_1
0.1944
p.A788E
TCGA-CM-6161
COAD
TCGA
LAPIVPLNPGDLTF
DEG_ODPH_VHL_1
0.1944
p.A788E
DO10116
COAD
ICGC
LAPIVPLNPGDLTF
DEG_ODPH_VHL_1
0.1944
p.R784C
DO233633
GACA
ICGC
LAPIVPLNPGDLTF
DEG_ODPH_VHL_1
0.0833
p.D803Y
SIDM00465
Ovarian Carcinoma
GDSC
LAPIVPLNPGDLTF
DEG_ODPH_VHL_1
0.6214
p.D803Y
ACH-002183
Ovarian Cancer
CCLE
LAPIVPLNPGDLTF
DEG_ODPH_VHL_1
0.6214
p.D803Y
OVMIU
ovary
COSMIC
LAPIVPLNPGDLTF
DEG_ODPH_VHL_1
0.6214
p.R784H
SIDM00145
T-Lymphoblastic Leukemia
GDSC
LAPIVPLNPGDLTF
DEG_ODPH_VHL_1
0.0833
p.R784H
ACH-001127
Leukemia
CCLE
LAPIVPLNPGDLTF
DEG_ODPH_VHL_1
0.0833
p.N787I
IA-LM
lung
COSMIC
LAPIVPLNPGDLTF
DEG_ODPH_VHL_1
0.1667
p.D810Y
NCI-H1993
lung
COSMIC
LAPIVPLNPGDLTF
DEG_ODPH_VHL_1
0.2222
Drug responses associated with MED12 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPIVPLNPGDLTF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q93074
Mediator of RNA polymerase II transcription subunit 12
DEG_ODPH_VHL_1
793:806
LAPIVPLNPGDLTF
VHL
0.9901
More...