DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPKEALIPPAMTV
Uniprot ID:
E9PAV3
Source protein:
Nascent polypeptide-associated complex subunit alpha, muscle-specific form
Source gene:
NACA
Class:
DEG_ODPH_VHL_1
Location:
1542:1555
E3 ligase:
VHL
DEGRON score:
0.937
ASA_SCORE:
101.4429
COIL:
0.9451
CONS_SCORE:
0.2288
DSS_SCORE:
0.5828
HELIX:
0.0243
FCONS_SCORE:
0.7196
RIG_SCORE:
0.6967
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1557P
DO228093
EOPC
ICGC
LAPKEALIPPAMTV
DEG_ODPH_VHL_1
0.2778
p.K1560N
DO14566
HNSC
ICGC
LAPKEALIPPAMTV
DEG_ODPH_VHL_1
0.3056
p.S1557F
DO37823
SKCM
ICGC
LAPKEALIPPAMTV
DEG_ODPH_VHL_1
0.2778
p.P1558R
DO50136
STAD
ICGC
LAPKEALIPPAMTV
DEG_ODPH_VHL_1
0.25
p.M1553V
DO43755
UCEC
ICGC
LAPKEALIPPAMTV
DEG_ODPH_VHL_1
0.6097
p.T1554A
PE/CA-PJ15
upper_aerodigestive_tract
COSMIC
LAPKEALIPPAMTV
DEG_ODPH_VHL_1
0.6028
p.K1537N
OACp4C
oesophagus
COSMIC
LAPKEALIPPAMTV
DEG_ODPH_VHL_1
0.3056
Drug responses associated with NACA mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPKEALIPPAMTV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
E9PAV3
Nascent polypeptide-associated complex subunit alpha, muscle-specific form
DEG_ODPH_VHL_1
1542:1555
LAPKEALIPPAMTV
VHL
0.937
More...