DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPKVLVFPVFV
Uniprot ID:
P49796
Source protein:
Regulator of G-protein signaling 3
Source gene:
RGS3
Class:
DEG_ODPH_VHL_1
Location:
546:557
E3 ligase:
VHL
DEGRON score:
0.5327
ASA_SCORE:
46.3667
COIL:
0.3853
CONS_SCORE:
0.5507
DSS_SCORE:
0.0192
HELIX:
0.0153
FCONS_SCORE:
1.1038
RIG_SCORE:
0.9293
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A566V
TCGA-06-5416
GBM
TCGA
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.0833
p.R567Q
TCGA-38-4631
LUAD
TCGA
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.0556
p.A547T
TCGA-CG-5723
STAD
TCGA
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.7139
p.G541C
TCGA-D3-A3CE
SKCM
TCGA
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.1944
p.P554H
TCGA-DU-7294
LGG
TCGA
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.6583
p.R550L
DO218998
BLCA
ICGC
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.8428
p.R550L
OV-90
ovary
COSMIC
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.8428
p.Q557R
DO4257
BRCA
ICGC
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.7329
p.T552I
DO8858
COAD
ICGC
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.7078
p.R559C
DO22237
LGG
ICGC
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.2778
p.D554Y
DO228985
LICA
ICGC
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.7325
p.Q557H
DO26536
LUSC
ICGC
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.7582
p.K546N
DO51511
PACA
ICGC
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.6918
p.M553I
DO229459
SKCA
ICGC
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.7618
p.G562W
DO37916
SKCM
ICGC
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.1944
p.G562W
RKO
large_intestine
COSMIC
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.1944
p.K558N
DO43186
UCEC
ICGC
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.3056
p.R550Q
DO43154
UCEC
ICGC
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.7329
p.D554N
DO43755
UCEC
ICGC
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.6932
p.V550I
SIDM01154
T-Lymphoblastic Leukemia
GDSC
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.5965
p.V550I
SIDM00257
Neuroblastoma
GDSC
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.5965
p.V550I
ACH-000953
Leukemia
CCLE
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.5965
p.V550I
ACH-002280
Neuroblastoma
CCLE
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.5965
p.V550I
NB13
autonomic_ganglia
COSMIC
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.5965
p.V550I
SUP-T1
haematopoietic_and_lymphoid_tissue
COSMIC
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.5965
p.G541D
ACH-000999
Colon/Colorectal Cancer
CCLE
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.1944
p.L558P
MHH-PREB-1
haematopoietic_and_lymphoid_tissue
COSMIC
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.3056
p.A567V
HEC-1
endometrium
COSMIC
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.0556
p.P565T
HCT-15
large_intestine
COSMIC
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.1111
p.V545M
MZ7-mel
skin
COSMIC
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.75
p.T549M
HCT-15
large_intestine
COSMIC
LAPKVLVFPVFV
DEG_ODPH_VHL_1
0.7423
Drug responses associated with RGS3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPKVLVFPVFV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49796
Regulator of G-protein signaling 3
DEG_ODPH_VHL_1
546:557
LAPKVLVFPVFV
VHL
0.5327
More...