DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPLHQSSFGSVQL
Uniprot ID:
E9PAV3
Source protein:
Nascent polypeptide-associated complex subunit alpha, muscle-specific form
Source gene:
NACA
Class:
DEG_ODPH_VHL_1
Location:
309:322
E3 ligase:
VHL
DEGRON score:
0.7144
ASA_SCORE:
89.7357
COIL:
0.9114
CONS_SCORE:
0.3706
DSS_SCORE:
0.4424
HELIX:
0.0344
FCONS_SCORE:
1.1577
RIG_SCORE:
0.6955
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G327C
TCGA-AA-3864
COAD
TCGA
LAPLHQSSFGSVQL
DEG_ODPH_VHL_1
0.1944
p.G327C
DO8490
COAD
ICGC
LAPLHQSSFGSVQL
DEG_ODPH_VHL_1
0.1944
p.A330V
TCGA-AD-6889
COAD
TCGA
LAPLHQSSFGSVQL
DEG_ODPH_VHL_1
0.1111
p.A330V
DO8463
COAD
ICGC
LAPLHQSSFGSVQL
DEG_ODPH_VHL_1
0.1111
p.P311H
TCGA-AX-A1CE
UCEC
TCGA
LAPLHQSSFGSVQL
DEG_ODPH_VHL_1
0.7694
p.P311H
DO42280
UCEC
ICGC
LAPLHQSSFGSVQL
DEG_ODPH_VHL_1
0.7694
p.S329G
TCGA-BR-4363
STAD
TCGA
LAPLHQSSFGSVQL
DEG_ODPH_VHL_1
0.1389
p.S329G
DO38815
STAD
ICGC
LAPLHQSSFGSVQL
DEG_ODPH_VHL_1
0.1389
p.S316Y
TCGA-BS-A0UF
UCEC
TCGA
LAPLHQSSFGSVQL
DEG_ODPH_VHL_1
0.6009
p.S316Y
DO41488
UCEC
ICGC
LAPLHQSSFGSVQL
DEG_ODPH_VHL_1
0.6009
p.P302L
TCGA-D9-A1JX
SKCM
TCGA
LAPLHQSSFGSVQL
DEG_ODPH_VHL_1
0.1389
p.P302L
DO37711
SKCM
ICGC
LAPLHQSSFGSVQL
DEG_ODPH_VHL_1
0.1389
p.F301V
TCGA-EO-A22X
UCEC
TCGA
LAPLHQSSFGSVQL
DEG_ODPH_VHL_1
0.1111
p.F301V
DO43907
UCEC
ICGC
LAPLHQSSFGSVQL
DEG_ODPH_VHL_1
0.1111
p.P302S
TCGA-FR-A3YO
SKCM
TCGA
LAPLHQSSFGSVQL
DEG_ODPH_VHL_1
0.1389
p.P302S
DO37419
SKCM
ICGC
LAPLHQSSFGSVQL
DEG_ODPH_VHL_1
0.1389
p.S304Y
TCGA-IB-7651
PAAD
TCGA
LAPLHQSSFGSVQL
DEG_ODPH_VHL_1
0.1944
p.S304Y
TCGA-ND-A4WC
UCS
TCGA
LAPLHQSSFGSVQL
DEG_ODPH_VHL_1
0.1944
p.S304Y
DO46657
PAAD
ICGC
LAPLHQSSFGSVQL
DEG_ODPH_VHL_1
0.1944
p.L331F
TCGA-K4-A3WS
BLCA
TCGA
LAPLHQSSFGSVQL
DEG_ODPH_VHL_1
0.0833
p.L331F
DO480
BLCA
ICGC
LAPLHQSSFGSVQL
DEG_ODPH_VHL_1
0.0833
p.S307P
DO233869
GACA
ICGC
LAPLHQSSFGSVQL
DEG_ODPH_VHL_1
0.2778
p.P299R
SIDM01664
Prostate Carcinoma
GDSC
LAPLHQSSFGSVQL
DEG_ODPH_VHL_1
0.0556
Drug responses associated with NACA mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPLHQSSFGSVQL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
E9PAV3
Nascent polypeptide-associated complex subunit alpha, muscle-specific form
DEG_ODPH_VHL_1
309:322
LAPLHQSSFGSVQL
VHL
0.7144
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