DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPLPHEVTQLRL
Uniprot ID:
A1X283
Source protein:
SH3 and PX domain-containing protein 2B
Source gene:
SH3PXD2B
Class:
DEG_ODPH_VHL_1
Location:
437:449
E3 ligase:
VHL
DEGRON score:
0.9482
ASA_SCORE:
87.7846
COIL:
0.7464
CONS_SCORE:
0.4565
DSS_SCORE:
0.4919
HELIX:
0.1377
FCONS_SCORE:
1.0221
RIG_SCORE:
0.7653
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T428K
TCGA-61-2092
OV
TCGA
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.0833
p.T428K
DO32449
OV
ICGC
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.0833
p.P441L
TCGA-AA-3715
COAD
TCGA
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.6471
p.P441L
DO8018
COAD
ICGC
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.6471
p.H442Y
TCGA-AP-A1DK
UCEC
TCGA
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.6118
p.H442Y
DO42033
UCEC
ICGC
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.6118
p.A454V
TCGA-AX-A06F
UCEC
TCGA
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.1944
p.A454V
DO41752
UCEC
ICGC
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.1944
p.E456D
TCGA-AX-A2HC
UCEC
TCGA
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.1389
p.E456D
DO41572
UCEC
ICGC
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.1389
p.S429G
TCGA-BR-7901
STAD
TCGA
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.1111
p.S429G
DO38463
STAD
ICGC
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.1111
p.P439T
TCGA-CA-6717
COAD
TCGA
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.7031
p.P439T
DO8264
COAD
ICGC
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.7031
p.E443K
TCGA-DK-A1AD
BLCA
TCGA
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.591
p.E443K
DO459
BLCA
ICGC
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.591
p.G450V
TCGA-HE-7130
KIRP
TCGA
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.3056
p.G450V
DO20776
KIRP
ICGC
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.3056
p.L455M
TCGA-X6-A7WA
SARC
TCGA
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.1667
p.L455M
DO220312
SARC
ICGC
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.1667
p.T428M
DO233898
GACA
ICGC
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.0833
p.T459M
DO233908
GACA
ICGC
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.0556
p.T459M
SIDM01051
Ovarian Carcinoma
GDSC
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.0556
p.T459M
ACH-000936
Ovarian Cancer
CCLE
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.0556
p.T459M
EFO-27
ovary
COSMIC
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.0556
p.R448W
DO220896
MELA
ICGC
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.7523
p.M428V
SIDM00237
Non-Small Cell Lung Carcinoma
GDSC
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.0833
p.M428V
ACH-000030
Lung Cancer
CCLE
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.0833
p.M428V
ACH-000779
Lung Cancer
CCLE
LAPLPHEVTQLRL
DEG_ODPH_VHL_1
0.0833
Drug responses associated with SH3PXD2B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPLPHEVTQLRL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A1X283
SH3 and PX domain-containing protein 2B
DEG_ODPH_VHL_1
437:449
LAPLPHEVTQLRL
VHL
0.9482
More...