DegronMD: protein-targeted degradation, mutation and drug response to degrons
Home
(current)
Browse
Proteins/Degrons
Mutations
Drug response
Network-rewiring
Drug resistance
Search
Tutorial
Download
Contact
Links
BSML
CPH
CGC
Degron:
LAPLPIPSNLFV
Uniprot ID:
O15027
Source protein:
Protein transport protein Sec16A
Source gene:
SEC16A
Class:
DEG_ODPH_VHL_1
Location:
2218:2229
E3 ligase:
VHL
DEGRON score:
0.7753
ASA_SCORE:
83.1167
COIL:
0.9058
CONS_SCORE:
0
DSS_SCORE:
0.452
HELIX:
0.0475
FCONS_SCORE:
0
RIG_SCORE:
0.7057
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A2219T
TCGA-D1-A17Q
UCEC
TCGA
LAPLPIPSNLFV
DEG_ODPH_VHL_1
0.7139
p.A2219T
SIDM00537
Colorectal Carcinoma
GDSC
LAPLPIPSNLFV
DEG_ODPH_VHL_1
0.7139
p.N2226D
SIDM00138
Non-Small Cell Lung Carcinoma
GDSC
LAPLPIPSNLFV
DEG_ODPH_VHL_1
0.5821
Drug responses associated with SEC16A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPLPIPSNLFV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15027
Protein transport protein Sec16A
DEG_ODPH_VHL_1
2218:2229
LAPLPIPSNLFV
VHL
0.7753
More...