DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPNRRTKFVSF
Uniprot ID:
Q8N5V2
Source protein:
Ephexin-1
Source gene:
NGEF
Class:
DEG_ODPH_VHL_1
Location:
596:607
E3 ligase:
VHL
DEGRON score:
0.7891
ASA_SCORE:
85.5083
COIL:
0.7173
CONS_SCORE:
0.3953
DSS_SCORE:
0.2778
HELIX:
0.2093
FCONS_SCORE:
0.8599
RIG_SCORE:
0.7826
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A597T
TCGA-D1-A167
UCEC
TCGA
LAPNRRTKFVSF
DEG_ODPH_VHL_1
0.7139
p.A597T
DO40978
UCEC
ICGC
LAPNRRTKFVSF
DEG_ODPH_VHL_1
0.7139
p.Q586K
TCGA-D3-A3C7
SKCM
TCGA
LAPNRRTKFVSF
DEG_ODPH_VHL_1
0.0556
p.Q586K
DO47569
SKCM
ICGC
LAPNRRTKFVSF
DEG_ODPH_VHL_1
0.0556
p.R600K
TCGA-EE-A3JA
SKCM
TCGA
LAPNRRTKFVSF
DEG_ODPH_VHL_1
0.6126
p.R600K
DO47625
SKCM
ICGC
LAPNRRTKFVSF
DEG_ODPH_VHL_1
0.6126
p.C614Y
TCGA-FI-A2D5
UCEC
TCGA
LAPNRRTKFVSF
DEG_ODPH_VHL_1
0.1389
p.C614Y
DO41331
UCEC
ICGC
LAPNRRTKFVSF
DEG_ODPH_VHL_1
0.1389
p.R600S
TCGA-FS-A1Z4
SKCM
TCGA
LAPNRRTKFVSF
DEG_ODPH_VHL_1
0.6316
p.R600S
DO37462
SKCM
ICGC
LAPNRRTKFVSF
DEG_ODPH_VHL_1
0.6316
p.P598T
TCGA-FS-A1ZP
SKCM
TCGA
LAPNRRTKFVSF
DEG_ODPH_VHL_1
0.7031
p.P598T
DO37703
SKCM
ICGC
LAPNRRTKFVSF
DEG_ODPH_VHL_1
0.7031
p.Q587H
DO48998
CESC
ICGC
LAPNRRTKFVSF
DEG_ODPH_VHL_1
0.5278
p.R609H
DO10373
COAD
ICGC
LAPNRRTKFVSF
DEG_ODPH_VHL_1
0.2778
p.R609H
DO227987
COCA
ICGC
LAPNRRTKFVSF
DEG_ODPH_VHL_1
0.2778
p.R609H
DO41903
UCEC
ICGC
LAPNRRTKFVSF
DEG_ODPH_VHL_1
0.2778
p.S614R
DO228976
LICA
ICGC
LAPNRRTKFVSF
DEG_ODPH_VHL_1
0.1389
p.N606K
DO229019
LICA
ICGC
LAPNRRTKFVSF
DEG_ODPH_VHL_1
0.6918
p.T594A
DO229022
LICA
ICGC
LAPNRRTKFVSF
DEG_ODPH_VHL_1
0.7222
p.S586Y
DO28249
OV
ICGC
LAPNRRTKFVSF
DEG_ODPH_VHL_1
0.0556
p.R615Q
DO35116
PACA
ICGC
LAPNRRTKFVSF
DEG_ODPH_VHL_1
0.1111
p.Q605P
DO47052
RECA
ICGC
LAPNRRTKFVSF
DEG_ODPH_VHL_1
0.7035
p.E591K
DO229453
SKCA
ICGC
LAPNRRTKFVSF
DEG_ODPH_VHL_1
0.1944
Drug responses associated with NGEF mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPNRRTKFVSF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N5V2
Ephexin-1
DEG_ODPH_VHL_1
596:607
LAPNRRTKFVSF
VHL
0.7891
More...