DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPPMLKFTRSLSM
Uniprot ID:
Q9UPX8
Source protein:
SH3 and multiple ankyrin repeat domains protein 2
Source gene:
SHANK2
Class:
DEG_ODPH_VHL_1
Location:
488:501
E3 ligase:
VHL
DEGRON score:
0.949
ASA_SCORE:
85.9429
COIL:
0.8726
CONS_SCORE:
0.3329
DSS_SCORE:
0.5673
HELIX:
0.0836
FCONS_SCORE:
1.1182
RIG_SCORE:
0.7151
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L511P
DO234353
ESAD
ICGC
LAPPMLKFTRSLSM
DEG_ODPH_VHL_1
0.0556
p.L495V
DO223051
ESCA
ICGC
LAPPMLKFTRSLSM
DEG_ODPH_VHL_1
0.6765
p.N507S
DO27891
ORCA
ICGC
LAPPMLKFTRSLSM
DEG_ODPH_VHL_1
0.1667
p.H497N
DO52124
PAEN
ICGC
LAPPMLKFTRSLSM
DEG_ODPH_VHL_1
0.7423
p.P492L
DO38404
STAD
ICGC
LAPPMLKFTRSLSM
DEG_ODPH_VHL_1
0.7582
p.P491S
SIDM00007
Other Solid Cancers
GDSC
LAPPMLKFTRSLSM
DEG_ODPH_VHL_1
0.5641
p.A492T
SIDM00202
Ewing's Sarcoma
GDSC
LAPPMLKFTRSLSM
DEG_ODPH_VHL_1
0.7139
p.A492T
EW-3
bone
COSMIC
LAPPMLKFTRSLSM
DEG_ODPH_VHL_1
0.7139
p.R485W
ACH-000943
Colon/Colorectal Cancer
CCLE
LAPPMLKFTRSLSM
DEG_ODPH_VHL_1
0.25
p.A484T
ACH-002118
Bone Cancer
CCLE
LAPPMLKFTRSLSM
DEG_ODPH_VHL_1
0.2222
p.A484T
EW-3
bone
COSMIC
LAPPMLKFTRSLSM
DEG_ODPH_VHL_1
0.2222
p.P504L
LU-134-A
lung
COSMIC
LAPPMLKFTRSLSM
DEG_ODPH_VHL_1
0.25
Drug responses associated with SHANK2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPPMLKFTRSLSM
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UPX8
SH3 and multiple ankyrin repeat domains protein 2
DEG_ODPH_VHL_1
488:501
LAPPMLKFTRSLSM
VHL
0.949
More...