DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPPPPPPQIKV
Uniprot ID:
P50548
Source protein:
ETS domain-containing transcription factor ERF
Source gene:
ERF
Class:
DEG_ODPH_VHL_1
Location:
416:427
E3 ligase:
VHL
DEGRON score:
0.8658
ASA_SCORE:
91.0167
COIL:
0.8892
CONS_SCORE:
0.3967
DSS_SCORE:
0.7565
HELIX:
0.016
FCONS_SCORE:
1.1091
RIG_SCORE:
0.5988
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P420L
TCGA-D5-6928
COAD
TCGA
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.6471
p.G414V
TCGA-IB-7651
PAAD
TCGA
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.2778
p.A417V
TCGA-XK-AAIW
PRAD
TCGA
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.6936
p.E432K
DO51639
CESC
ICGC
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.1944
p.D416N
DO49939
CESC
ICGC
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.6932
p.E430Q
DO48989
CESC
ICGC
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.25
p.R412S
DO229029
LICA
ICGC
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.2222
p.R412L
DO25189
LUAD
ICGC
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.2222
p.R408H
DO46657
PAAD
ICGC
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.1111
p.R412C
DO37991
SKCM
ICGC
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.2222
p.G433V
DO38495
STAD
ICGC
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.1667
p.R411W
DO38619
STAD
ICGC
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.1944
p.R411W
DO38259
STAD
ICGC
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.1944
p.R418H
DO43306
UCEC
ICGC
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.8244
p.R418H
DO43755
UCEC
ICGC
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.8244
p.A413T
SIDM00789
Colorectal Carcinoma
GDSC
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.25
p.A413T
SIDM01251
T-Cell Non-Hodgkin's Lymphoma
GDSC
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.25
p.A413T
ACH-000509
Lymphoma
CCLE
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.25
p.A413T
ACH-000997
Colon/Colorectal Cancer
CCLE
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.25
p.A413T
ACH-001061
Colon/Colorectal Cancer
CCLE
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.25
p.A413T
ACH-002240
Lymphoma
CCLE
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.25
p.A413T
H9
haematopoietic_and_lymphoid_tissue
COSMIC
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.25
p.A413T
HCT-15
large_intestine
COSMIC
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.25
p.S431L
SIDM00917
Acute Myeloid Leukemia
GDSC
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.6667
p.S431L
ACH-002218
Leukemia
CCLE
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.6667
p.S431L
CESS
haematopoietic_and_lymphoid_tissue
COSMIC
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.6667
p.E432D
SIDM00999
Bladder Carcinoma
GDSC
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.1944
p.E432D
ACH-000973
Bladder Cancer
CCLE
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.1944
p.E432D
639-V
urinary_tract
COSMIC
LAPPPPPPQIKV
DEG_ODPH_VHL_1
0.1944
Drug responses associated with ERF mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPPPPPPQIKV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P50548
ETS domain-containing transcription factor ERF
DEG_ODPH_VHL_1
416:427
LAPPPPPPQIKV
VHL
0.8658
More...