DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPQADPRPSMSL
Uniprot ID:
O94983
Source protein:
Calmodulin-binding transcription activator 2
Source gene:
CAMTA2
Class:
DEG_ODPH_VHL_1
Location:
344:356
E3 ligase:
VHL
DEGRON score:
0.7304
ASA_SCORE:
86.2692
COIL:
0.8613
CONS_SCORE:
0.3565
DSS_SCORE:
0.6042
HELIX:
0.0745
FCONS_SCORE:
1.0478
RIG_SCORE:
0.6565
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G360A
TCGA-29-1784
OV
TCGA
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.2222
p.G339R
TCGA-CV-7261
HNSC
TCGA
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.1944
p.R365G
TCGA-E6-A2P8
UCEC
TCGA
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.0833
p.S341F
TCGA-EO-A3B0
UCEC
TCGA
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.25
p.R357L
TCGA-GN-A26C
SKCM
TCGA
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.3056
p.E363G
DO473
BLCA
ICGC
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.1389
p.M354L
DO227854
BRCA
ICGC
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.5999
p.T362S
DO12100
GBM
ICGC
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.1667
p.Q347K
DO228952
LICA
ICGC
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.5833
p.G337A
DO28561
OV
ICGC
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.1389
p.R334L
DO37782
SKCM
ICGC
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.0556
p.G361S
DO38202
STAD
ICGC
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.1944
p.R342G
DO40924
UCEC
ICGC
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.2778
p.R338Q
SIDM01164
Glioma
GDSC
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.1667
p.R338Q
SW1783
central_nervous_system
COSMIC
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.1667
p.P334L
SIDM00272
Breast Carcinoma
GDSC
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.0556
p.P334L
MDA-MB-453
breast
COSMIC
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.0556
p.T362M
SIDM00528
Breast Carcinoma
GDSC
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.1667
p.T362M
MDA-MB-361
breast
COSMIC
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.1667
p.P355L
ACH-000651
Colon/Colorectal Cancer
CCLE
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.7582
p.P355L
SW620
large_intestine
COSMIC
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.7582
p.T338M
MDA-MB-361
breast
COSMIC
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.1667
p.T344M
MDA-MB-361
breast
COSMIC
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.7423
p.P349L
SW620
large_intestine
COSMIC
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.7582
p.T341M
MDA-MB-361
breast
COSMIC
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.25
p.P352L
SW620
large_intestine
COSMIC
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.6471
p.T339M
MDA-MB-361
breast
COSMIC
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.1944
p.P350L
SW620
large_intestine
COSMIC
LAPQADPRPSMSL
DEG_ODPH_VHL_1
0.6471
Drug responses associated with CAMTA2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPQADPRPSMSL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94983
Calmodulin-binding transcription activator 2
DEG_ODPH_VHL_1
344:356
LAPQADPRPSMSL
VHL
0.7304
More...