DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPQDGSGYMDVGV
Uniprot ID:
Q9Y4P9
Source protein:
Sperm flagellar protein 1
Source gene:
SPEF1
Class:
DEG_ODPH_VHL_1
Location:
128:141
E3 ligase:
VHL
DEGRON score:
0.9486
ASA_SCORE:
69.0786
COIL:
0.7386
CONS_SCORE:
0.3658
DSS_SCORE:
0.6248
HELIX:
0.1191
FCONS_SCORE:
1.0079
RIG_SCORE:
0.6522
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q143H
TCGA-AA-A00N
COAD
TCGA
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.2778
p.Q143H
DO9876
COAD
ICGC
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.2778
p.Q143H
DO233130
GACA
ICGC
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.2778
p.Q131H
TCGA-AP-A0LM
UCEC
TCGA
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.647
p.Q131H
DO43306
UCEC
ICGC
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.647
p.P130T
TCGA-EE-A181
SKCM
TCGA
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.7031
p.P130T
DO37444
SKCM
ICGC
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.7031
p.G121D
DO230343
COCA
ICGC
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.1389
p.M137K
DO228202
LICA
ICGC
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.6951
p.P151Q
DO229009
LICA
ICGC
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.0556
p.G140C
DO50902
LICA
ICGC
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.6489
p.G123S
DO229257
THCA
ICGC
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.1944
p.A122T
DO41199
UCEC
ICGC
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.1667
p.R146Q
SIDM00376
B-Lymphoblastic Leukemia
GDSC
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.1944
p.R146Q
ACH-000156
Leukemia
CCLE
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.1944
p.R146Q
MHH-CALL-4
haematopoietic_and_lymphoid_tissue
COSMIC
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.1944
p.A145T
SIDM00973
Melanoma
GDSC
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.2222
p.A145T
SIDM00845
Burkitt's Lymphoma
GDSC
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.2222
p.A145T
SIDM00311
Mesothelioma
GDSC
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.2222
p.A145T
SIDM00854
Burkitt's Lymphoma
GDSC
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.2222
p.A145T
SIDM00032
Bladder Carcinoma
GDSC
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.2222
p.A145T
SIDM00793
Burkitt's Lymphoma
GDSC
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.2222
p.A145T
SIDM00431
T-Lymphoblastic Leukemia
GDSC
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.2222
p.A145T
SIDM00808
Burkitt's Lymphoma
GDSC
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.2222
p.A145T
SIDM01254
Burkitt's Lymphoma
GDSC
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.2222
p.P151S
SIDM00569
Osteosarcoma
GDSC
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.0556
p.P151S
ACH-002178
Bone Cancer
CCLE
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.0556
p.P151S
NY
bone
COSMIC
LAPQDGSGYMDVGV
DEG_ODPH_VHL_1
0.0556
Drug responses associated with SPEF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPQDGSGYMDVGV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y4P9
Sperm flagellar protein 1
DEG_ODPH_VHL_1
128:141
LAPQDGSGYMDVGV
VHL
0.9486
More...