DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPQQVPGIKFNI
Uniprot ID:
Q9H2A9
Source protein:
Carbohydrate sulfotransferase 8
Source gene:
CHST8
Class:
DEG_ODPH_VHL_1
Location:
37:49
E3 ligase:
VHL
DEGRON score:
0.985
ASA_SCORE:
81.7923
COIL:
0.7609
CONS_SCORE:
0.3084
DSS_SCORE:
0.5056
HELIX:
0.0408
FCONS_SCORE:
0.9521
RIG_SCORE:
0.7346
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R50S
TCGA-55-7570
LUAD
TCGA
LAPQQVPGIKFNI
DEG_ODPH_VHL_1
0.3056
p.R50S
DO25280
LUAD
ICGC
LAPQQVPGIKFNI
DEG_ODPH_VHL_1
0.3056
p.A38T
TCGA-EJ-5511
PRAD
TCGA
LAPQQVPGIKFNI
DEG_ODPH_VHL_1
0.7139
p.A38T
DO36324
PRAD
ICGC
LAPQQVPGIKFNI
DEG_ODPH_VHL_1
0.7139
p.A38T
SIDM00216
Colorectal Carcinoma
GDSC
LAPQQVPGIKFNI
DEG_ODPH_VHL_1
0.7139
p.A38T
ACH-000989
Colon/Colorectal Cancer
CCLE
LAPQQVPGIKFNI
DEG_ODPH_VHL_1
0.7139
p.A38T
SNU-175
large_intestine
COSMIC
LAPQQVPGIKFNI
DEG_ODPH_VHL_1
0.7139
p.T35M
TCGA-F4-6855
COAD
TCGA
LAPQQVPGIKFNI
DEG_ODPH_VHL_1
0.2778
p.T35M
DO8025
COAD
ICGC
LAPQQVPGIKFNI
DEG_ODPH_VHL_1
0.2778
p.T35M
DO234187
ESAD
ICGC
LAPQQVPGIKFNI
DEG_ODPH_VHL_1
0.2778
p.T35M
ACH-001518
Endometrial/Uterine Cancer
CCLE
LAPQQVPGIKFNI
DEG_ODPH_VHL_1
0.2778
p.E36D
TCGA-FG-A710
LGG
TCGA
LAPQQVPGIKFNI
DEG_ODPH_VHL_1
0.3056
p.E36D
DO48494
LGG
ICGC
LAPQQVPGIKFNI
DEG_ODPH_VHL_1
0.3056
p.P39L
DO936
BOCA
ICGC
LAPQQVPGIKFNI
DEG_ODPH_VHL_1
0.7582
p.R52M
DO229031
LICA
ICGC
LAPQQVPGIKFNI
DEG_ODPH_VHL_1
0.25
p.P34H
DO35242
PACA
ICGC
LAPQQVPGIKFNI
DEG_ODPH_VHL_1
0.25
p.L27F
DO229502
SKCA
ICGC
LAPQQVPGIKFNI
DEG_ODPH_VHL_1
0.0556
p.H56Q
SIDM00469
Pancreatic Carcinoma
GDSC
LAPQQVPGIKFNI
DEG_ODPH_VHL_1
0.1389
p.H56Q
PSN1
pancreas
COSMIC
LAPQQVPGIKFNI
DEG_ODPH_VHL_1
0.1389
p.D33Y
SIDM00743
Non-Small Cell Lung Carcinoma
GDSC
LAPQQVPGIKFNI
DEG_ODPH_VHL_1
0.2222
p.D33Y
ACH-000448
Lung Cancer
CCLE
LAPQQVPGIKFNI
DEG_ODPH_VHL_1
0.2222
p.D33Y
NCI-H1666
lung
COSMIC
LAPQQVPGIKFNI
DEG_ODPH_VHL_1
0.2222
p.L58I
ACH-002025
Colon/Colorectal Cancer
CCLE
LAPQQVPGIKFNI
DEG_ODPH_VHL_1
0.0833
p.P59L
ACH-002287
Colon/Colorectal Cancer
CCLE
LAPQQVPGIKFNI
DEG_ODPH_VHL_1
0.0556
p.P59L
NCI-H630
large_intestine
COSMIC
LAPQQVPGIKFNI
DEG_ODPH_VHL_1
0.0556
Drug responses associated with CHST8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPQQVPGIKFNI
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H2A9
Carbohydrate sulfotransferase 8
DEG_ODPH_VHL_1
37:49
LAPQQVPGIKFNI
VHL
0.985
More...