DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPQVDETQQQFIF
Uniprot ID:
O60684
Source protein:
Importin subunit alpha-7
Source gene:
KPNA6
Class:
DEG_ODPH_VHL_1
Location:
511:524
E3 ligase:
VHL
DEGRON score:
0.9018
ASA_SCORE:
83.6
COIL:
0.7637
CONS_SCORE:
0.4192
DSS_SCORE:
0.6234
HELIX:
0.1024
FCONS_SCORE:
0.8825
RIG_SCORE:
0.7808
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T515M
DO230343
COCA
ICGC
LAPQVDETQQQFIF
DEG_ODPH_VHL_1
0.7423
p.Q511P
DO219174
LUSC
ICGC
LAPQVDETQQQFIF
DEG_ODPH_VHL_1
0.7035
p.P513T
TCGA-AP-A0LF
UCEC
TCGA
LAPQVDETQQQFIF
DEG_ODPH_VHL_1
0.7031
p.D513N
DO225115
BRCA
ICGC
LAPQVDETQQQFIF
DEG_ODPH_VHL_1
0.6932
p.Q514P
TCGA-94-8491
LUSC
TCGA
LAPQVDETQQQFIF
DEG_ODPH_VHL_1
0.5924
p.P510T
DO43610
UCEC
ICGC
LAPQVDETQQQFIF
DEG_ODPH_VHL_1
0.3056
p.P527S
TCGA-05-4396
LUAD
TCGA
LAPQVDETQQQFIF
DEG_ODPH_VHL_1
0.25
p.P527S
DO23838
LUAD
ICGC
LAPQVDETQQQFIF
DEG_ODPH_VHL_1
0.25
p.D507N
TCGA-A6-5661
COAD
TCGA
LAPQVDETQQQFIF
DEG_ODPH_VHL_1
0.2222
p.S507N
DO220899
MELA
ICGC
LAPQVDETQQQFIF
DEG_ODPH_VHL_1
0.2222
p.D504N
DO8634
COAD
ICGC
LAPQVDETQQQFIF
DEG_ODPH_VHL_1
0.1389
p.V504A
SIDM00191
Kidney Carcinoma
GDSC
LAPQVDETQQQFIF
DEG_ODPH_VHL_1
0.1389
p.V504A
ACH-002090
Kidney Cancer
CCLE
LAPQVDETQQQFIF
DEG_ODPH_VHL_1
0.1389
p.V504A
BB65-RCC
kidney
COSMIC
LAPQVDETQQQFIF
DEG_ODPH_VHL_1
0.1389
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Drug responses associated with KPNA6 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of LAPQVDETQQQFIF
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60684
Importin subunit alpha-7
DEG_ODPH_VHL_1
511:524
LAPQVDETQQQFIF
VHL
0.9018
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