DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPQVGTATLSL
Uniprot ID:
Q5XX13
Source protein:
F-box/WD repeat-containing protein 10
Source gene:
FBXW10
Class:
DEG_ODPH_VHL_1
Location:
954:965
E3 ligase:
VHL
DEGRON score:
0.9958
ASA_SCORE:
80.0833
COIL:
0.8212
CONS_SCORE:
0.2654
DSS_SCORE:
0.3564
HELIX:
0.1267
FCONS_SCORE:
0.9128
RIG_SCORE:
0.7766
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M953L
TCGA-27-1835
GBM
TCGA
LAPQVGTATLSL
DEG_ODPH_VHL_1
0.3056
p.M953L
DO228654
LICA
ICGC
LAPQVGTATLSL
DEG_ODPH_VHL_1
0.3056
p.A975T
TCGA-A5-A0G2
UCEC
TCGA
LAPQVGTATLSL
DEG_ODPH_VHL_1
0.0556
p.R952C
TCGA-AA-3845
COAD
TCGA
LAPQVGTATLSL
DEG_ODPH_VHL_1
0.2778
p.R952C
DO10020
COAD
ICGC
LAPQVGTATLSL
DEG_ODPH_VHL_1
0.2778
p.Q946H
TCGA-AX-A06F
UCEC
TCGA
LAPQVGTATLSL
DEG_ODPH_VHL_1
0.1111
p.R971C
TCGA-AZ-4315
COAD
TCGA
LAPQVGTATLSL
DEG_ODPH_VHL_1
0.1667
p.R971C
DO8842
COAD
ICGC
LAPQVGTATLSL
DEG_ODPH_VHL_1
0.1667
p.R971C
DO229054
LICA
ICGC
LAPQVGTATLSL
DEG_ODPH_VHL_1
0.1667
p.K973N
DO48424
BLCA
ICGC
LAPQVGTATLSL
DEG_ODPH_VHL_1
0.1111
p.V965A
DO223036
ESCA
ICGC
LAPQVGTATLSL
DEG_ODPH_VHL_1
0.6936
p.V965A
DO233079
GACA
ICGC
LAPQVGTATLSL
DEG_ODPH_VHL_1
0.6936
p.V965A
DO229508
LAML
ICGC
LAPQVGTATLSL
DEG_ODPH_VHL_1
0.6936
p.V965A
DO225399
LAML
ICGC
LAPQVGTATLSL
DEG_ODPH_VHL_1
0.6936
p.V965A
DO231102
LUSC
ICGC
LAPQVGTATLSL
DEG_ODPH_VHL_1
0.6936
p.Y973C
SIDM00938
Breast Carcinoma
GDSC
LAPQVGTATLSL
DEG_ODPH_VHL_1
0.1111
p.Y973C
ACH-000902
Breast Cancer
CCLE
LAPQVGTATLSL
DEG_ODPH_VHL_1
0.1111
p.Y973C
CAL-148
breast
COSMIC
LAPQVGTATLSL
DEG_ODPH_VHL_1
0.1111
p.R971H
SIDM01588
Endometrial Carcinoma
GDSC
LAPQVGTATLSL
DEG_ODPH_VHL_1
0.1667
p.A953P
MM1S
haematopoietic_and_lymphoid_tissue
COSMIC
LAPQVGTATLSL
DEG_ODPH_VHL_1
0.3056
p.V960A
KYSE-520
oesophagus
COSMIC
LAPQVGTATLSL
DEG_ODPH_VHL_1
0.6936
Drug responses associated with FBXW10 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPQVGTATLSL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5XX13
F-box/WD repeat-containing protein 10
DEG_ODPH_VHL_1
954:965
LAPQVGTATLSL
VHL
0.9958
More...