DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPRASVPSVQI
Uniprot ID:
Q86YP4
Source protein:
Transcriptional repressor p66-alpha
Source gene:
GATAD2A
Class:
DEG_ODPH_VHL_1
Location:
270:281
E3 ligase:
VHL
DEGRON score:
0.9085
ASA_SCORE:
93.8833
COIL:
0.8811
CONS_SCORE:
0.3642
DSS_SCORE:
0.3908
HELIX:
0.0875
FCONS_SCORE:
0.936
RIG_SCORE:
0.7366
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S262T
TCGA-50-5049
LUAD
TCGA
LAPRASVPSVQI
DEG_ODPH_VHL_1
0.5556
p.S262T
DO23705
LUAD
ICGC
LAPRASVPSVQI
DEG_ODPH_VHL_1
0.5556
p.T263I
TCGA-55-8302
LUAD
TCGA
LAPRASVPSVQI
DEG_ODPH_VHL_1
0.5833
p.A271P
TCGA-AJ-A3OJ
UCEC
TCGA
LAPRASVPSVQI
DEG_ODPH_VHL_1
0.7503
p.A271P
DO42753
UCEC
ICGC
LAPRASVPSVQI
DEG_ODPH_VHL_1
0.7503
p.A271P
SIDM01016
T-Lymphoblastic Leukemia
GDSC
LAPRASVPSVQI
DEG_ODPH_VHL_1
0.7503
p.A271P
ACH-000995
Leukemia
CCLE
LAPRASVPSVQI
DEG_ODPH_VHL_1
0.7503
p.A271P
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
LAPRASVPSVQI
DEG_ODPH_VHL_1
0.7503
p.P265L
TCGA-BS-A0UL
UCEC
TCGA
LAPRASVPSVQI
DEG_ODPH_VHL_1
0.1944
p.P265L
DO41319
UCEC
ICGC
LAPRASVPSVQI
DEG_ODPH_VHL_1
0.1944
p.G283E
TCGA-VQ-A8PX
STAD
TCGA
LAPRASVPSVQI
DEG_ODPH_VHL_1
0.2778
p.G283E
DO51778
STAD
ICGC
LAPRASVPSVQI
DEG_ODPH_VHL_1
0.2778
p.G264W
SIDM00753
Squamous Cell Lung Carcinoma
GDSC
LAPRASVPSVQI
DEG_ODPH_VHL_1
0.1667
p.G264W
ACH-000781
Lung Cancer
CCLE
LAPRASVPSVQI
DEG_ODPH_VHL_1
0.1667
p.G264W
NCI-H2023
lung
COSMIC
LAPRASVPSVQI
DEG_ODPH_VHL_1
0.1667
p.I286V
SIDM01045
Endometrial Carcinoma
GDSC
LAPRASVPSVQI
DEG_ODPH_VHL_1
0.1944
p.I286V
ACH-000978
Endometrial/Uterine Cancer
CCLE
LAPRASVPSVQI
DEG_ODPH_VHL_1
0.1944
p.I286V
EN
endometrium
COSMIC
LAPRASVPSVQI
DEG_ODPH_VHL_1
0.1944
Drug responses associated with GATAD2A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPRASVPSVQI
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86YP4
Transcriptional repressor p66-alpha
DEG_ODPH_VHL_1
270:281
LAPRASVPSVQI
VHL
0.9085
More...