DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPRFNSPTYRVDL
Uniprot ID:
Q96JQ0
Source protein:
Protocadherin-16
Source gene:
DCHS1
Class:
DEG_ODPH_VHL_1
Location:
996:1009
E3 ligase:
VHL
DEGRON score:
0.8438
ASA_SCORE:
49.4357
COIL:
0.3935
CONS_SCORE:
0.5103
DSS_SCORE:
0.4766
HELIX:
0.004
FCONS_SCORE:
0.9575
RIG_SCORE:
0.7566
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G995W
TCGA-49-AARE
LUAD
TCGA
LAPRFNSPTYRVDL
DEG_ODPH_VHL_1
0.3056
p.G995W
DO218922
LUAD
ICGC
LAPRFNSPTYRVDL
DEG_ODPH_VHL_1
0.3056
p.P1003T
TCGA-75-6214
LUAD
TCGA
LAPRFNSPTYRVDL
DEG_ODPH_VHL_1
0.5919
p.P1003T
DO24830
LUAD
ICGC
LAPRFNSPTYRVDL
DEG_ODPH_VHL_1
0.5919
p.R999Q
TCGA-AX-A2HC
UCEC
TCGA
LAPRFNSPTYRVDL
DEG_ODPH_VHL_1
0.6218
p.R999Q
DO41572
UCEC
ICGC
LAPRFNSPTYRVDL
DEG_ODPH_VHL_1
0.6218
p.R999Q
SIDM00512
Non-Small Cell Lung Carcinoma
GDSC
LAPRFNSPTYRVDL
DEG_ODPH_VHL_1
0.6218
p.R999Q
SIDM00801
Melanoma
GDSC
LAPRFNSPTYRVDL
DEG_ODPH_VHL_1
0.6218
p.R999Q
SIDM01650
Non-Cancerous
GDSC
LAPRFNSPTYRVDL
DEG_ODPH_VHL_1
0.6218
p.R999Q
SIDM00540
Oral Cavity Carcinoma
GDSC
LAPRFNSPTYRVDL
DEG_ODPH_VHL_1
0.6218
p.R999Q
SIDM01228
Melanoma
GDSC
LAPRFNSPTYRVDL
DEG_ODPH_VHL_1
0.6218
p.R999Q
SIDM01424
B-Lymphoblastic Leukemia
GDSC
LAPRFNSPTYRVDL
DEG_ODPH_VHL_1
0.6218
p.R994H
TCGA-VQ-A91K
STAD
TCGA
LAPRFNSPTYRVDL
DEG_ODPH_VHL_1
0.2778
p.R994H
DO51785
STAD
ICGC
LAPRFNSPTYRVDL
DEG_ODPH_VHL_1
0.2778
p.N1001S
DO50393
ESAD
ICGC
LAPRFNSPTYRVDL
DEG_ODPH_VHL_1
0.5958
p.R1006S
DO229022
LICA
ICGC
LAPRFNSPTYRVDL
DEG_ODPH_VHL_1
0.6316
p.D1008E
DO229031
LICA
ICGC
LAPRFNSPTYRVDL
DEG_ODPH_VHL_1
0.5647
p.A997S
DO229052
LICA
ICGC
LAPRFNSPTYRVDL
DEG_ODPH_VHL_1
0.7588
p.L996Q
DO27104
LUSC
ICGC
LAPRFNSPTYRVDL
DEG_ODPH_VHL_1
0.7765
p.R1006H
DO35154
PACA
ICGC
LAPRFNSPTYRVDL
DEG_ODPH_VHL_1
0.7133
p.D990Y
SIDM00789
Colorectal Carcinoma
GDSC
LAPRFNSPTYRVDL
DEG_ODPH_VHL_1
0.1667
p.D990Y
ACH-000997
Colon/Colorectal Cancer
CCLE
LAPRFNSPTYRVDL
DEG_ODPH_VHL_1
0.1667
p.D990Y
ACH-001061
Colon/Colorectal Cancer
CCLE
LAPRFNSPTYRVDL
DEG_ODPH_VHL_1
0.1667
p.D990Y
HCT-15
large_intestine
COSMIC
LAPRFNSPTYRVDL
DEG_ODPH_VHL_1
0.1667
p.A997D
ACH-000634
Brain Cancer
CCLE
LAPRFNSPTYRVDL
DEG_ODPH_VHL_1
0.7793
Drug responses associated with DCHS1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPRFNSPTYRVDL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96JQ0
Protocadherin-16
DEG_ODPH_VHL_1
996:1009
LAPRFNSPTYRVDL
VHL
0.8438
More...