DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPRLSSGALKV
Uniprot ID:
P48382
Source protein:
DNA-binding protein RFX5
Source gene:
RFX5
Class:
DEG_ODPH_VHL_1
Location:
351:362
E3 ligase:
VHL
DEGRON score:
0.8518
ASA_SCORE:
72.8083
COIL:
0.7299
CONS_SCORE:
0.5754
DSS_SCORE:
0.1908
HELIX:
0.0308
FCONS_SCORE:
1.0752
RIG_SCORE:
0.7225
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L351V
TCGA-63-A5MT
LUSC
TCGA
LAPRLSSGALKV
DEG_ODPH_VHL_1
0.6765
p.L351V
DO219163
LUSC
ICGC
LAPRLSSGALKV
DEG_ODPH_VHL_1
0.6765
p.P366T
TCGA-A8-A09Z
BRCA
TCGA
LAPRLSSGALKV
DEG_ODPH_VHL_1
0.2222
p.P366T
DO5521
BRCA
ICGC
LAPRLSSGALKV
DEG_ODPH_VHL_1
0.2222
p.S356Y
TCGA-DU-6392
LGG
TCGA
LAPRLSSGALKV
DEG_ODPH_VHL_1
0.712
p.S356Y
DO22237
LGG
ICGC
LAPRLSSGALKV
DEG_ODPH_VHL_1
0.712
p.L355I
TCGA-FD-A3SP
BLCA
TCGA
LAPRLSSGALKV
DEG_ODPH_VHL_1
0.6063
p.L355I
DO594
BLCA
ICGC
LAPRLSSGALKV
DEG_ODPH_VHL_1
0.6063
p.S347Y
TCGA-VQ-A8P2
STAD
TCGA
LAPRLSSGALKV
DEG_ODPH_VHL_1
0.6667
p.S347Y
DO51761
STAD
ICGC
LAPRLSSGALKV
DEG_ODPH_VHL_1
0.6667
p.I350F
DO228470
LICA
ICGC
LAPRLSSGALKV
DEG_ODPH_VHL_1
0.3056
p.P345S
DO222731
MELA
ICGC
LAPRLSSGALKV
DEG_ODPH_VHL_1
0.1667
p.S368F
SIDM01228
Melanoma
GDSC
LAPRLSSGALKV
DEG_ODPH_VHL_1
0.1667
p.S368F
ACH-000931
Skin Cancer
CCLE
LAPRLSSGALKV
DEG_ODPH_VHL_1
0.1667
p.S368F
ACH-001024
Skin Cancer
CCLE
LAPRLSSGALKV
DEG_ODPH_VHL_1
0.1667
p.S368F
CHL-1
skin
COSMIC
LAPRLSSGALKV
DEG_ODPH_VHL_1
0.1667
p.G372R
ACH-001786
Colon/Colorectal Cancer
CCLE
LAPRLSSGALKV
DEG_ODPH_VHL_1
0.0556
Drug responses associated with RFX5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPRLSSGALKV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P48382
DNA-binding protein RFX5
DEG_ODPH_VHL_1
351:362
LAPRLSSGALKV
VHL
0.8518
More...