DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPRMPFSIGQVTM
Uniprot ID:
Q8ND24
Source protein:
RING finger protein 214
Source gene:
RNF214
Class:
DEG_ODPH_VHL_1
Location:
459:472
E3 ligase:
VHL
DEGRON score:
0.9923
ASA_SCORE:
78.0857
COIL:
0.9025
CONS_SCORE:
0.6103
DSS_SCORE:
0.4038
HELIX:
0.0341
FCONS_SCORE:
0.9484
RIG_SCORE:
0.7135
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L459M
TCGA-AA-3715
COAD
TCGA
LAPRMPFSIGQVTM
DEG_ODPH_VHL_1
0.711
p.V475A
TCGA-B5-A1MR
UCEC
TCGA
LAPRMPFSIGQVTM
DEG_ODPH_VHL_1
0.25
p.R462Q
TCGA-EY-A2OM
UCEC
TCGA
LAPRMPFSIGQVTM
DEG_ODPH_VHL_1
0.6218
p.R462W
TCGA-N8-A4PO
UCS
TCGA
LAPRMPFSIGQVTM
DEG_ODPH_VHL_1
0.7523
p.I467T
TCGA-SC-A6LM
MESO
TCGA
LAPRMPFSIGQVTM
DEG_ODPH_VHL_1
0.5966
p.T459P
DO8018
COAD
ICGC
LAPRMPFSIGQVTM
DEG_ODPH_VHL_1
0.7031
p.V475I
DO7828
COAD
ICGC
LAPRMPFSIGQVTM
DEG_ODPH_VHL_1
0.25
p.V475I
DO37435
SKCM
ICGC
LAPRMPFSIGQVTM
DEG_ODPH_VHL_1
0.25
p.V475I
DO50140
STAD
ICGC
LAPRMPFSIGQVTM
DEG_ODPH_VHL_1
0.25
p.R454W
DO233935
GACA
ICGC
LAPRMPFSIGQVTM
DEG_ODPH_VHL_1
0.1944
p.V455M
DO14250
HNSC
ICGC
LAPRMPFSIGQVTM
DEG_ODPH_VHL_1
0.2222
p.M470I
DO23590
LUAD
ICGC
LAPRMPFSIGQVTM
DEG_ODPH_VHL_1
0.7618
p.P477H
DO37431
SKCM
ICGC
LAPRMPFSIGQVTM
DEG_ODPH_VHL_1
0.1944
p.R454Q
DO50127
STAD
ICGC
LAPRMPFSIGQVTM
DEG_ODPH_VHL_1
0.1944
p.M472V
SIDM01649
Non-Cancerous
GDSC
LAPRMPFSIGQVTM
DEG_ODPH_VHL_1
0.6097
p.M472V
SIDM00184
Melanoma
GDSC
LAPRMPFSIGQVTM
DEG_ODPH_VHL_1
0.6097
p.R466W
NCI-H1703
lung
COSMIC
LAPRMPFSIGQVTM
DEG_ODPH_VHL_1
0.8634
Drug responses associated with RNF214 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPRMPFSIGQVTM
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8ND24
RING finger protein 214
DEG_ODPH_VHL_1
459:472
LAPRMPFSIGQVTM
VHL
0.9923
More...