DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPRQQQQQTELDM
Uniprot ID:
P27540
Source protein:
Aryl hydrocarbon receptor nuclear translocator
Source gene:
ARNT
Class:
DEG_ODPH_VHL_1
Location:
499:512
E3 ligase:
VHL
DEGRON score:
0.9345
ASA_SCORE:
100.1786
COIL:
0.6694
CONS_SCORE:
0.3569
DSS_SCORE:
0.7328
HELIX:
0.2913
FCONS_SCORE:
1.0557
RIG_SCORE:
0.7031
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S521G
TCGA-CD-A4MG
STAD
TCGA
LAPRQQQQQTELDM
DEG_ODPH_VHL_1
0.0833
p.S521G
DO48009
STAD
ICGC
LAPRQQQQQTELDM
DEG_ODPH_VHL_1
0.0833
p.R516T
DO225366
BRCA
ICGC
LAPRQQQQQTELDM
DEG_ODPH_VHL_1
0.2222
p.D511Y
DO234347
ESAD
ICGC
LAPRQQQQQTELDM
DEG_ODPH_VHL_1
0.6214
p.A500E
DO229045
LICA
ICGC
LAPRQQQQQTELDM
DEG_ODPH_VHL_1
0.7701
p.M512T
SIDM02015
Colorectal Carcinoma
GDSC
LAPRQQQQQTELDM
DEG_ODPH_VHL_1
0.7423
Drug responses associated with ARNT mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPRQQQQQTELDM
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P27540
Aryl hydrocarbon receptor nuclear translocator
DEG_ODPH_VHL_1
499:512
LAPRQQQQQTELDM
VHL
0.9345
More...