DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPRTQQPGLEV
Uniprot ID:
Q9NR34
Source protein:
Mannosyl-oligosaccharide 1,2-alpha-mannosidase IC
Source gene:
MAN1C1
Class:
DEG_ODPH_VHL_1
Location:
54:65
E3 ligase:
VHL
DEGRON score:
0.8145
ASA_SCORE:
79.3417
COIL:
0.7138
CONS_SCORE:
0.2176
DSS_SCORE:
0.3033
HELIX:
0.2432
FCONS_SCORE:
0.814
RIG_SCORE:
0.7324
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L52H
TCGA-34-5231
LUSC
TCGA
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.2778
p.L52H
DO26772
LUSC
ICGC
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.2778
p.R51C
TCGA-AX-A2HD
UCEC
TCGA
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.25
p.R51C
DO42608
UCEC
ICGC
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.25
p.L63V
TCGA-CQ-5326
HNSC
TCGA
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.5654
p.L63V
DO15286
HNSC
ICGC
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.5654
p.A55P
TCGA-HU-A4G8
STAD
TCGA
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.7503
p.A55P
DO47819
STAD
ICGC
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.7503
p.H72N
DO222718
COCA
ICGC
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.1389
p.R57Q
DO222884
COCA
ICGC
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.6218
p.E68K
DO218136
GACA
ICGC
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.25
p.P69T
DO14210
HNSC
ICGC
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.2222
p.P69T
DO231286
THCA
ICGC
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.2222
p.G59E
DO50301
SKCM
ICGC
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.7199
p.R52Q
DO51275
SKCM
ICGC
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.2778
p.T46I
DO43186
UCEC
ICGC
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.1111
p.G62D
SIDM02021
Esophageal Carcinoma
GDSC
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.6087
p.Q60K
SIDM00973
Melanoma
GDSC
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.5833
p.Q60K
ACH-000827
Skin Cancer
CCLE
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.5833
p.P56A
SIDM00672
Hepatocellular Carcinoma
GDSC
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.7503
p.P56A
SIDM00875
Breast Carcinoma
GDSC
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.7503
p.P56A
SIDM00793
Burkitt's Lymphoma
GDSC
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.7503
p.P56A
SIDM00956
Esophageal Squamous Cell Carcinoma
GDSC
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.7503
p.P56A
SIDM01664
Prostate Carcinoma
GDSC
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.7503
p.P56S
SIDM00243
Other Solid Cancers
GDSC
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.6752
p.P56S
NEC8
testis
COSMIC
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.6752
p.R48S
ACH-001853
Bile Duct Cancer
CCLE
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.1667
p.R53H
NCI-H1155
lung
COSMIC
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.3056
p.I52T
MFE-319
endometrium
COSMIC
LAPRTQQPGLEV
DEG_ODPH_VHL_1
0.2778
Drug responses associated with MAN1C1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPRTQQPGLEV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NR34
Mannosyl-oligosaccharide 1,2-alpha-mannosidase IC
DEG_ODPH_VHL_1
54:65
LAPRTQQPGLEV
VHL
0.8145
More...