DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPRVNLTFRKILL
Uniprot ID:
Q6NS38
Source protein:
DNA oxidative demethylase ALKBH2
Source gene:
ALKBH2
Class:
DEG_ODPH_VHL_1
Location:
245:258
E3 ligase:
VHL
DEGRON score:
0.5345
ASA_SCORE:
47.4357
COIL:
0.4357
CONS_SCORE:
0.6948
DSS_SCORE:
0.2647
HELIX:
0.0479
FCONS_SCORE:
1.1546
RIG_SCORE:
0.8913
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R254C
TCGA-KL-8323
KICH
TCGA
LAPRVNLTFRKILL
DEG_ODPH_VHL_1
0.719
p.R254C
DO220331
KICH
ICGC
LAPRVNLTFRKILL
DEG_ODPH_VHL_1
0.719
p.R254H
SIDM00534
Colorectal Carcinoma
GDSC
LAPRVNLTFRKILL
DEG_ODPH_VHL_1
0.7133
p.R254H
ACH-000986
Colon/Colorectal Cancer
CCLE
LAPRVNLTFRKILL
DEG_ODPH_VHL_1
0.7133
p.R254H
HT-115
large_intestine
COSMIC
LAPRVNLTFRKILL
DEG_ODPH_VHL_1
0.7133
p.K242M
TCGA-DS-A1OC
CESC
TCGA
LAPRVNLTFRKILL
DEG_ODPH_VHL_1
0.3611
p.K242M
DO6329
CESC
ICGC
LAPRVNLTFRKILL
DEG_ODPH_VHL_1
0.3611
p.K261T
TCGA-EO-A3AY
UCEC
TCGA
LAPRVNLTFRKILL
DEG_ODPH_VHL_1
0.3611
p.K261T
DO43202
UCEC
ICGC
LAPRVNLTFRKILL
DEG_ODPH_VHL_1
0.3611
p.V244I
SIDM01693
B-Lymphoblastic Leukemia
GDSC
LAPRVNLTFRKILL
DEG_ODPH_VHL_1
0.3056
p.V240M
TCGA-AX-A2HD
UCEC
TCGA
LAPRVNLTFRKILL
DEG_ODPH_VHL_1
0.1944
p.V240M
DO42608
UCEC
ICGC
LAPRVNLTFRKILL
DEG_ODPH_VHL_1
0.1944
p.P239R
TCGA-L5-A8NE
ESCA
TCGA
LAPRVNLTFRKILL
DEG_ODPH_VHL_1
0.1667
p.S237R
TCGA-ED-A459
LIHC
TCGA
LAPRVNLTFRKILL
DEG_ODPH_VHL_1
0.1111
p.S237R
DO44974
LIHC
ICGC
LAPRVNLTFRKILL
DEG_ODPH_VHL_1
0.1111
p.Y235H
SIDM00537
Colorectal Carcinoma
GDSC
LAPRVNLTFRKILL
DEG_ODPH_VHL_1
0.0556
p.Y235H
ACH-000982
Colon/Colorectal Cancer
CCLE
LAPRVNLTFRKILL
DEG_ODPH_VHL_1
0.0556
p.Y235H
ACH-001345
Colon/Colorectal Cancer
CCLE
LAPRVNLTFRKILL
DEG_ODPH_VHL_1
0.0556
p.Y235H
GP5d
large_intestine
COSMIC
LAPRVNLTFRKILL
DEG_ODPH_VHL_1
0.0556
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Drug responses associated with ALKBH2 mutations
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Cancer
Mutation (In Degron?)
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Drug
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All proteins holding degron of LAPRVNLTFRKILL
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6NS38
DNA oxidative demethylase ALKBH2
DEG_ODPH_VHL_1
245:258
LAPRVNLTFRKILL
VHL
0.5345
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