DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPSATEPPSLGV
Uniprot ID:
Q71RG4
Source protein:
Transmembrane and ubiquitin-like domain-containing protein 2
Source gene:
TMUB2
Class:
DEG_ODPH_VHL_1
Location:
256:268
E3 ligase:
VHL
DEGRON score:
0.9207
ASA_SCORE:
79.3154
COIL:
0.9248
CONS_SCORE:
0.3861
DSS_SCORE:
0.2966
HELIX:
0.0487
FCONS_SCORE:
0.6923
RIG_SCORE:
0.6715
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P250S
TCGA-BA-A6DJ
HNSC
TCGA
LAPSATEPPSLGV
DEG_ODPH_VHL_1
0.1667
p.V277A
TCGA-FI-A2D5
UCEC
TCGA
LAPSATEPPSLGV
DEG_ODPH_VHL_1
0.0833
p.S265C
TCGA-FP-8211
STAD
TCGA
LAPSATEPPSLGV
DEG_ODPH_VHL_1
0.643
p.R269Q
DO8264
COAD
ICGC
LAPSATEPPSLGV
DEG_ODPH_VHL_1
0.3056
p.R269Q
DO10871
GBM
ICGC
LAPSATEPPSLGV
DEG_ODPH_VHL_1
0.3056
p.R269Q
DO41020
UCEC
ICGC
LAPSATEPPSLGV
DEG_ODPH_VHL_1
0.3056
p.R269Q
DO41235
UCEC
ICGC
LAPSATEPPSLGV
DEG_ODPH_VHL_1
0.3056
p.M254V
DO233888
GACA
ICGC
LAPSATEPPSLGV
DEG_ODPH_VHL_1
0.2778
p.M254V
MOLT-16
haematopoietic_and_lymphoid_tissue
COSMIC
LAPSATEPPSLGV
DEG_ODPH_VHL_1
0.2778
p.V260L
DO228952
LICA
ICGC
LAPSATEPPSLGV
DEG_ODPH_VHL_1
0.6765
p.V255L
DO50828
LICA
ICGC
LAPSATEPPSLGV
DEG_ODPH_VHL_1
0.3056
p.A278V
DO221547
PACA
ICGC
LAPSATEPPSLGV
DEG_ODPH_VHL_1
0.0556
p.V257A
DO41331
UCEC
ICGC
LAPSATEPPSLGV
DEG_ODPH_VHL_1
0.6936
p.M274V
SIDM00431
T-Lymphoblastic Leukemia
GDSC
LAPSATEPPSLGV
DEG_ODPH_VHL_1
0.1667
p.M274V
ACH-000918
Leukemia
CCLE
LAPSATEPPSLGV
DEG_ODPH_VHL_1
0.1667
p.M274V
MOLT-16
haematopoietic_and_lymphoid_tissue
COSMIC
LAPSATEPPSLGV
DEG_ODPH_VHL_1
0.1667
p.V260E
NCI-H660
prostate
COSMIC
LAPSATEPPSLGV
DEG_ODPH_VHL_1
0.7693
Drug responses associated with TMUB2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPSATEPPSLGV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q71RG4
Transmembrane and ubiquitin-like domain-containing protein 2
DEG_ODPH_VHL_1
256:268
LAPSATEPPSLGV
VHL
0.9207
More...