DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
LAPSHPHPAVVGI
Uniprot ID:
Q9BQW3
Source protein:
Transcription factor COE4
Source gene:
EBF4
Class:
DEG_ODPH_VHL_1
Location:
418:430
E3 ligase:
VHL
DEGRON score:
0.9428
ASA_SCORE:
70.1923
COIL:
0.8134
CONS_SCORE:
0.2949
DSS_SCORE:
0.3762
HELIX:
0.0669
FCONS_SCORE:
0.8483
RIG_SCORE:
0.6649
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A434V
SIDM02039
Colorectal Carcinoma
GDSC
LAPSHPHPAVVGI
DEG_ODPH_VHL_1
0.2222
p.G413W
ACH-000623
Brain Cancer
CCLE
LAPSHPHPAVVGI
DEG_ODPH_VHL_1
0.1944
p.P423S
ACH-000822
Skin Cancer
CCLE
LAPSHPHPAVVGI
DEG_ODPH_VHL_1
0.5641
Drug responses associated with EBF4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPSHPHPAVVGI
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BQW3
Transcription factor COE4
DEG_ODPH_VHL_1
418:430
LAPSHPHPAVVGI
VHL
0.9428
More...