DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPSPAPPLAPLPV
Uniprot ID:
Q6ZRS2
Source protein:
Helicase SRCAP
Source gene:
SRCAP
Class:
DEG_ODPH_VHL_1
Location:
1598:1611
E3 ligase:
VHL
DEGRON score:
0.8733
ASA_SCORE:
83.2214
COIL:
0.9188
CONS_SCORE:
0.1663
DSS_SCORE:
0.3662
HELIX:
0.0143
FCONS_SCORE:
0.9522
RIG_SCORE:
0.66
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q1594H
TCGA-AA-A010
COAD
TCGA
LAPSPAPPLAPLPV
DEG_ODPH_VHL_1
0.2222
p.A1588T
TCGA-AP-A059
UCEC
TCGA
LAPSPAPPLAPLPV
DEG_ODPH_VHL_1
0.0556
p.A1588T
DO41361
UCEC
ICGC
LAPSPAPPLAPLPV
DEG_ODPH_VHL_1
0.0556
p.A1591T
TCGA-B5-A3FA
UCEC
TCGA
LAPSPAPPLAPLPV
DEG_ODPH_VHL_1
0.1389
p.A1591V
TCGA-QQ-A8VF
SARC
TCGA
LAPSPAPPLAPLPV
DEG_ODPH_VHL_1
0.1389
p.A1591V
DO220258
SARC
ICGC
LAPSPAPPLAPLPV
DEG_ODPH_VHL_1
0.1389
p.Q1599E
DO5675
BRCA
ICGC
LAPSPAPPLAPLPV
DEG_ODPH_VHL_1
0.6744
p.Q1599E
DO7819
COAD
ICGC
LAPSPAPPLAPLPV
DEG_ODPH_VHL_1
0.6744
p.P1595T
DO42977
UCEC
ICGC
LAPSPAPPLAPLPV
DEG_ODPH_VHL_1
0.25
p.A1618V
SIDM00338
Acute Myeloid Leukemia
GDSC
LAPSPAPPLAPLPV
DEG_ODPH_VHL_1
0.1389
p.A1618V
SIDM00560
Gastric Carcinoma
GDSC
LAPSPAPPLAPLPV
DEG_ODPH_VHL_1
0.1389
p.A1618V
MKN7
stomach
COSMIC
LAPSPAPPLAPLPV
DEG_ODPH_VHL_1
0.1389
p.A1618V
ME-1
haematopoietic_and_lymphoid_tissue
COSMIC
LAPSPAPPLAPLPV
DEG_ODPH_VHL_1
0.1389
p.P1602A
SIDM01157
Other Solid Cancers
GDSC
LAPSPAPPLAPLPV
DEG_ODPH_VHL_1
0.6392
p.P1602A
SW954
vulva
COSMIC
LAPSPAPPLAPLPV
DEG_ODPH_VHL_1
0.6392
p.M1590I
SIDM01372
Pancreatic Carcinoma
GDSC
LAPSPAPPLAPLPV
DEG_ODPH_VHL_1
0.1111
p.M1590I
ACH-000266
Pancreatic Cancer
CCLE
LAPSPAPPLAPLPV
DEG_ODPH_VHL_1
0.1111
p.T1606A
NCI-H1648
lung
COSMIC
LAPSPAPPLAPLPV
DEG_ODPH_VHL_1
0.7139
Drug responses associated with SRCAP mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPSPAPPLAPLPV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6ZRS2
Helicase SRCAP
DEG_ODPH_VHL_1
1598:1611
LAPSPAPPLAPLPV
VHL
0.8733
More...