DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPSPSGMAGLSF
Uniprot ID:
Q96RG2
Source protein:
PAS domain-containing serine/threonine-protein kinase
Source gene:
PASK
Class:
DEG_ODPH_VHL_1
Location:
626:638
E3 ligase:
VHL
DEGRON score:
0.998
ASA_SCORE:
58.7462
COIL:
0.8164
CONS_SCORE:
0.352
DSS_SCORE:
0.4138
HELIX:
0.0998
FCONS_SCORE:
1.1227
RIG_SCORE:
0.6741
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E645K
TCGA-A5-A0G1
UCEC
TCGA
LAPSPSGMAGLSF
DEG_ODPH_VHL_1
0.1389
p.E645K
DO42472
UCEC
ICGC
LAPSPSGMAGLSF
DEG_ODPH_VHL_1
0.1389
p.P646S
TCGA-A5-A0G2
UCEC
TCGA
LAPSPSGMAGLSF
DEG_ODPH_VHL_1
0.1111
p.P646S
DO41235
UCEC
ICGC
LAPSPSGMAGLSF
DEG_ODPH_VHL_1
0.1111
p.R622Q
TCGA-AA-A00N
COAD
TCGA
LAPSPSGMAGLSF
DEG_ODPH_VHL_1
0.2222
p.R622Q
DO9876
COAD
ICGC
LAPSPSGMAGLSF
DEG_ODPH_VHL_1
0.2222
p.L636I
TCGA-CK-6746
COAD
TCGA
LAPSPSGMAGLSF
DEG_ODPH_VHL_1
0.6063
p.L636I
DO7938
COAD
ICGC
LAPSPSGMAGLSF
DEG_ODPH_VHL_1
0.6063
p.W617C
TCGA-CN-6010
HNSC
TCGA
LAPSPSGMAGLSF
DEG_ODPH_VHL_1
0.0833
p.W617C
DO14766
HNSC
ICGC
LAPSPSGMAGLSF
DEG_ODPH_VHL_1
0.0833
p.P646Q
TCGA-CZ-5470
KIRC
TCGA
LAPSPSGMAGLSF
DEG_ODPH_VHL_1
0.1111
p.P646Q
DO19158
KIRC
ICGC
LAPSPSGMAGLSF
DEG_ODPH_VHL_1
0.1111
p.P628S
TCGA-J4-A83I
PRAD
TCGA
LAPSPSGMAGLSF
DEG_ODPH_VHL_1
0.6752
p.P628S
DO48600
PRAD
ICGC
LAPSPSGMAGLSF
DEG_ODPH_VHL_1
0.6752
p.L648M
TCGA-X6-A7WA
SARC
TCGA
LAPSPSGMAGLSF
DEG_ODPH_VHL_1
0.0556
p.L648M
DO220312
SARC
ICGC
LAPSPSGMAGLSF
DEG_ODPH_VHL_1
0.0556
p.P646T
DO229022
LICA
ICGC
LAPSPSGMAGLSF
DEG_ODPH_VHL_1
0.1111
p.P646L
DO46556
OV
ICGC
LAPSPSGMAGLSF
DEG_ODPH_VHL_1
0.1111
p.P641H
SIDM00079
Ovarian Carcinoma
GDSC
LAPSPSGMAGLSF
DEG_ODPH_VHL_1
0.25
p.P641H
ACH-000811
Ovarian Cancer
CCLE
LAPSPSGMAGLSF
DEG_ODPH_VHL_1
0.25
p.P641H
SK-OV-3
ovary
COSMIC
LAPSPSGMAGLSF
DEG_ODPH_VHL_1
0.25
Drug responses associated with PASK mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPSPSGMAGLSF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96RG2
PAS domain-containing serine/threonine-protein kinase
DEG_ODPH_VHL_1
626:638
LAPSPSGMAGLSF
VHL
0.998
More...