DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPTYFSAPGVMNF
Uniprot ID:
O15234
Source protein:
Protein CASC3
Source gene:
CASC3
Class:
DEG_ODPH_VHL_1
Location:
617:630
E3 ligase:
VHL
DEGRON score:
0.7145
ASA_SCORE:
43.5357
COIL:
0.8335
CONS_SCORE:
0.459
DSS_SCORE:
0.4185
HELIX:
0.0314
FCONS_SCORE:
0.9853
RIG_SCORE:
0.6954
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y635H
TCGA-DI-A1BU
UCEC
TCGA
LAPTYFSAPGVMNF
DEG_ODPH_VHL_1
0.1944
p.Y635H
DO42023
UCEC
ICGC
LAPTYFSAPGVMNF
DEG_ODPH_VHL_1
0.1944
p.P611L
DO222905
BTCA
ICGC
LAPTYFSAPGVMNF
DEG_ODPH_VHL_1
0.1667
p.G609E
DO222536
MELA
ICGC
LAPTYFSAPGVMNF
DEG_ODPH_VHL_1
0.1111
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Drug responses associated with CASC3 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of LAPTYFSAPGVMNF
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15234
Protein CASC3
DEG_ODPH_VHL_1
617:630
LAPTYFSAPGVMNF
VHL
0.7145
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