DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPVSQQGWRSIRL
Uniprot ID:
Q99973
Source protein:
Telomerase protein component 1
Source gene:
TEP1
Class:
DEG_ODPH_VHL_1
Location:
888:901
E3 ligase:
VHL
DEGRON score:
0.6441
ASA_SCORE:
61.3286
COIL:
0.5574
CONS_SCORE:
0.5142
DSS_SCORE:
0.3497
HELIX:
0.0138
FCONS_SCORE:
0.9612
RIG_SCORE:
0.7585
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L901R
TCGA-BR-4292
STAD
TCGA
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.8428
p.P887H
TCGA-CV-5442
HNSC
TCGA
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.3056
p.P887H
DO14678
HNSC
ICGC
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.3056
p.P887L
TCGA-D3-A3C7
SKCM
TCGA
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.3056
p.P887L
DO47569
SKCM
ICGC
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.3056
p.L888F
TCGA-D3-A8GM
SKCM
TCGA
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.6981
p.L888F
DO50288
SKCM
ICGC
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.6981
p.E882D
TCGA-E6-A1LX
UCEC
TCGA
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.1667
p.E882D
DO41020
UCEC
ICGC
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.1667
p.R897H
TCGA-FP-A4BE
STAD
TCGA
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.7133
p.P890S
TCGA-HC-7820
PRAD
TCGA
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.6752
p.P890S
DO49811
PRAD
ICGC
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.6752
p.M902I
DO230659
LAML
ICGC
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.3056
p.M902I
DO231140
LAML
ICGC
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.3056
p.R910S
DO228929
LICA
ICGC
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.0833
p.H885N
DO229018
LICA
ICGC
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.25
p.R878Q
DO23436
LINC
ICGC
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.0556
p.E898K
DO231072
LUSC
ICGC
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.7022
p.E898K
ACH-000439
Leukemia
CCLE
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.7022
p.E898K
ACH-002041
Thyroid Cancer
CCLE
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.7022
p.E898K
ACH-002274
Leukemia
CCLE
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.7022
p.E898K
ME-1
haematopoietic_and_lymphoid_tissue
COSMIC
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.7022
p.E898K
MLMA
haematopoietic_and_lymphoid_tissue
COSMIC
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.7022
p.G893E
DO37547
SKCM
ICGC
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.7199
p.G893R
DO37547
SKCM
ICGC
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.7568
p.R907L
DO37595
SKCM
ICGC
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.1667
p.L878F
DO51259
SKCM
ICGC
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.0556
p.L878F
ACH-000987
Skin Cancer
CCLE
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.0556
p.L878F
Mewo
skin
COSMIC
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.0556
p.V901A
DO38683
STAD
ICGC
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.6936
p.R878W
SIDM01293
Colorectal Carcinoma
GDSC
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.0556
p.R908Q
SIDM00193
Colorectal Carcinoma
GDSC
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.1389
p.R908Q
SNU-81
large_intestine
COSMIC
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.1389
p.P890L
SIDM01029
Esophageal Squamous Cell Carcinoma
GDSC
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.7582
p.P890L
KYSE-270
oesophagus
COSMIC
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.7582
p.M910T
SIDM01619
Endometrial Carcinoma
GDSC
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.0833
p.R894H
ACH-000997
Colon/Colorectal Cancer
CCLE
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.8244
p.R894H
ACH-001061
Colon/Colorectal Cancer
CCLE
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.8244
p.R894H
HCT-15
large_intestine
COSMIC
LAPVSQQGWRSIRL
DEG_ODPH_VHL_1
0.8244
Drug responses associated with TEP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPVSQQGWRSIRL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q99973
Telomerase protein component 1
DEG_ODPH_VHL_1
888:901
LAPVSQQGWRSIRL
VHL
0.6441
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