DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LASTPATT
Uniprot ID:
Q12888
Source protein:
TP53-binding protein 1
Source gene:
TP53BP1
Class:
DEG_SCF_FBW7_1
Location:
331:338
E3 ligase:
FBXW7
DEGRON score:
0.9996
ASA_SCORE:
80.275
COIL:
0.8638
CONS_SCORE:
0.4384
DSS_SCORE:
0.426
HELIX:
0.0611
FCONS_SCORE:
1.2698
RIG_SCORE:
0.7211
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P340S
TCGA-90-A4ED
LUSC
TCGA
LASTPATT
DEG_SCF_FBW7_1
0.2778
p.P340S
TCGA-RP-A693
SKCM
TCGA
LASTPATT
DEG_SCF_FBW7_1
0.2778
p.S325F
TCGA-C5-A1MH
CESC
TCGA
LASTPATT
DEG_SCF_FBW7_1
0.1667
p.R348K
DO3822
BRCA
ICGC
LASTPATT
DEG_SCF_FBW7_1
0.0556
p.S345C
DO51612
CESC
ICGC
LASTPATT
DEG_SCF_FBW7_1
0.1389
p.A336D
DO229006
LICA
ICGC
LASTPATT
DEG_SCF_FBW7_1
0.6682
p.P335T
DO229008
LICA
ICGC
LASTPATT
DEG_SCF_FBW7_1
0.7031
p.P335S
DO45482
LUSC
ICGC
LASTPATT
DEG_SCF_FBW7_1
0.6752
p.P335S
DO51268
SKCM
ICGC
LASTPATT
DEG_SCF_FBW7_1
0.6752
p.L339V
DO52144
PAEN
ICGC
LASTPATT
DEG_SCF_FBW7_1
0.3056
p.G327V
DO229523
PRAD
ICGC
LASTPATT
DEG_SCF_FBW7_1
0.2222
p.S323L
DO219871
SKCA
ICGC
LASTPATT
DEG_SCF_FBW7_1
0.5556
p.G328W
DO229250
THCA
ICGC
LASTPATT
DEG_SCF_FBW7_1
0.25
p.S335C
SIDM00568
Gastric Carcinoma
GDSC
LASTPATT
DEG_SCF_FBW7_1
0.7541
p.S335C
SIDM00817
Kidney Carcinoma
GDSC
LASTPATT
DEG_SCF_FBW7_1
0.7541
p.S335C
SIDM01471
Chronic Myelogenous Leukemia
GDSC
LASTPATT
DEG_SCF_FBW7_1
0.7541
p.S335C
ACH-000247
Gastric Cancer
CCLE
LASTPATT
DEG_SCF_FBW7_1
0.7541
p.S335C
ACH-000604
Leukemia
CCLE
LASTPATT
DEG_SCF_FBW7_1
0.7541
p.S335C
OCUM-1
stomach
COSMIC
LASTPATT
DEG_SCF_FBW7_1
0.7541
p.D322G
SIDM01019
Acute Myeloid Leukemia
GDSC
LASTPATT
DEG_SCF_FBW7_1
0.0833
p.D322G
ACH-002258
Leukemia
CCLE
LASTPATT
DEG_SCF_FBW7_1
0.0833
p.D322G
KMOE-2
haematopoietic_and_lymphoid_tissue
COSMIC
LASTPATT
DEG_SCF_FBW7_1
0.0833
p.S330C
OCUM-1
stomach
COSMIC
LASTPATT
DEG_SCF_FBW7_1
0.3056
Drug responses associated with TP53BP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LASTPATT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12888
TP53-binding protein 1
DEG_SCF_FBW7_1
331:338
LASTPATT
FBXW7
0.9996
More...