DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LATPGNT
Uniprot ID:
Q9H2E6
Source protein:
Semaphorin-6A
Source gene:
SEMA6A
Class:
DEG_SCF_FBW7_1
Location:
732:738
E3 ligase:
FBXW7
DEGRON score:
0.7311
ASA_SCORE:
63.7143
COIL:
0.8063
CONS_SCORE:
0.3375
DSS_SCORE:
0.4752
HELIX:
0.1047
FCONS_SCORE:
0.8803
RIG_SCORE:
0.6725
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M727I
TCGA-17-Z062
LUAD
TCGA
LATPGNT
DEG_SCF_FBW7_1
0.1944
p.K740R
TCGA-AP-A059
UCEC
TCGA
LATPGNT
DEG_SCF_FBW7_1
0.2778
p.K740R
DO41361
UCEC
ICGC
LATPGNT
DEG_SCF_FBW7_1
0.2778
p.A745S
TCGA-F1-6874
STAD
TCGA
LATPGNT
DEG_SCF_FBW7_1
0.1389
p.A745S
TCGA-Q1-A5R2
CESC
TCGA
LATPGNT
DEG_SCF_FBW7_1
0.1389
p.A745S
DO49003
CESC
ICGC
LATPGNT
DEG_SCF_FBW7_1
0.1389
p.A745S
DO38201
STAD
ICGC
LATPGNT
DEG_SCF_FBW7_1
0.1389
p.T724K
DO229028
LICA
ICGC
LATPGNT
DEG_SCF_FBW7_1
0.1111
p.H728Q
DO229041
LICA
ICGC
LATPGNT
DEG_SCF_FBW7_1
0.2222
p.L723I
DO229008
LICA
ICGC
LATPGNT
DEG_SCF_FBW7_1
0.0833
p.K748N
SIDM00571
Pancreatic Carcinoma
GDSC
LATPGNT
DEG_SCF_FBW7_1
0.0556
p.K748N
KP-3
pancreas
COSMIC
LATPGNT
DEG_SCF_FBW7_1
0.0556
p.G724S
SIDM00839
Colorectal Carcinoma
GDSC
LATPGNT
DEG_SCF_FBW7_1
0.1111
p.G724S
LoVo
large_intestine
COSMIC
LATPGNT
DEG_SCF_FBW7_1
0.1111
p.A733T
ACH-000967
Colon/Colorectal Cancer
CCLE
LATPGNT
DEG_SCF_FBW7_1
0.6028
p.A733T
ACH-001199
Colon/Colorectal Cancer
CCLE
LATPGNT
DEG_SCF_FBW7_1
0.6028
p.A733T
SNU-C2B
large_intestine
COSMIC
LATPGNT
DEG_SCF_FBW7_1
0.6028
p.K731N
KP-3
pancreas
COSMIC
LATPGNT
DEG_SCF_FBW7_1
0.3056
Drug responses associated with SEMA6A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LATPGNT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H2E6
Semaphorin-6A
DEG_SCF_FBW7_1
732:738
LATPGNT
FBXW7
0.7311
More...