DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LATPGYS
Uniprot ID:
Q5SYE7
Source protein:
NHS-like protein 1
Source gene:
NHSL1
Class:
DEG_SCF_FBW7_1
Location:
574:580
E3 ligase:
FBXW7
DEGRON score:
0.9393
ASA_SCORE:
87.1714
COIL:
0.9293
CONS_SCORE:
0.4597
DSS_SCORE:
0.6016
HELIX:
0.0264
FCONS_SCORE:
0.9353
RIG_SCORE:
0.6186
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H573N
TCGA-A5-A0G1
UCEC
TCGA
LATPGYS
DEG_SCF_FBW7_1
0.3056
p.H573N
DO42472
UCEC
ICGC
LATPGYS
DEG_SCF_FBW7_1
0.3056
p.T576P
DO233917
GACA
ICGC
LATPGYS
DEG_SCF_FBW7_1
0.7031
p.R566G
ACH-000634
Brain Cancer
CCLE
LATPGYS
DEG_SCF_FBW7_1
0.1111
p.S568P
ACH-001669
Leukemia
CCLE
LATPGYS
DEG_SCF_FBW7_1
0.1667
p.S568P
ACH-002238
Leukemia
CCLE
LATPGYS
DEG_SCF_FBW7_1
0.1667
p.S568P
GR-ST
haematopoietic_and_lymphoid_tissue
COSMIC
LATPGYS
DEG_SCF_FBW7_1
0.1667
p.S564P
GR-ST
haematopoietic_and_lymphoid_tissue
COSMIC
LATPGYS
DEG_SCF_FBW7_1
0.0556
Drug responses associated with NHSL1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LATPGYS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5SYE7
NHS-like protein 1
DEG_SCF_FBW7_1
574:580
LATPGYS
FBXW7
0.9393
More...