DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LATPITT
Uniprot ID:
P51610
Source protein:
Host cell factor 1
Source gene:
HCFC1
Class:
DEG_SCF_FBW7_1
Location:
906:912
E3 ligase:
FBXW7
DEGRON score:
0.7661
ASA_SCORE:
84.3
COIL:
0.7856
CONS_SCORE:
0.5347
DSS_SCORE:
0.2626
HELIX:
0.0176
FCONS_SCORE:
1.1809
RIG_SCORE:
0.8058
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G896R
TCGA-86-A4JF
LUAD
TCGA
LATPITT
DEG_SCF_FBW7_1
0.0556
p.G896R
TCGA-IB-7651
PAAD
TCGA
LATPITT
DEG_SCF_FBW7_1
0.0556
p.G896R
DO45317
LUAD
ICGC
LATPITT
DEG_SCF_FBW7_1
0.0556
p.G896R
DO46657
PAAD
ICGC
LATPITT
DEG_SCF_FBW7_1
0.0556
p.A897V
TCGA-AJ-A3BG
UCEC
TCGA
LATPITT
DEG_SCF_FBW7_1
0.0833
p.A897V
DO42633
UCEC
ICGC
LATPITT
DEG_SCF_FBW7_1
0.0833
p.G914D
TCGA-BG-A222
UCEC
TCGA
LATPITT
DEG_SCF_FBW7_1
0.2778
p.G914D
DO42977
UCEC
ICGC
LATPITT
DEG_SCF_FBW7_1
0.2778
p.T908M
TCGA-CD-A4MG
STAD
TCGA
LATPITT
DEG_SCF_FBW7_1
0.7423
p.T908M
TCGA-CK-5916
COAD
TCGA
LATPITT
DEG_SCF_FBW7_1
0.7423
p.T908M
TCGA-PG-A6IB
UCEC
TCGA
LATPITT
DEG_SCF_FBW7_1
0.7423
p.T908M
DO8786
COAD
ICGC
LATPITT
DEG_SCF_FBW7_1
0.7423
p.T908M
DO48009
STAD
ICGC
LATPITT
DEG_SCF_FBW7_1
0.7423
p.T908M
DO52419
UCEC
ICGC
LATPITT
DEG_SCF_FBW7_1
0.7423
p.S905F
TCGA-D3-A8GI
SKCM
TCGA
LATPITT
DEG_SCF_FBW7_1
0.3056
p.S905F
DO50284
SKCM
ICGC
LATPITT
DEG_SCF_FBW7_1
0.3056
p.A897E
DO229008
LICA
ICGC
LATPITT
DEG_SCF_FBW7_1
0.0833
p.G896W
DO229259
THCA
ICGC
LATPITT
DEG_SCF_FBW7_1
0.0556
p.P909L
ACH-000269
Brain Cancer
CCLE
LATPITT
DEG_SCF_FBW7_1
0.7582
Drug responses associated with HCFC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LATPITT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P51610
Host cell factor 1
DEG_SCF_FBW7_1
906:912
LATPITT
FBXW7
0.7661
More...