DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LATPMPT
Uniprot ID:
A3KN83
Source protein:
Protein strawberry notch homolog 1
Source gene:
SBNO1
Class:
DEG_SCF_FBW7_1
Location:
33:39
E3 ligase:
FBXW7
DEGRON score:
0.9915
ASA_SCORE:
69.4429
COIL:
0.912
CONS_SCORE:
0.2789
DSS_SCORE:
0.5773
HELIX:
0.0401
FCONS_SCORE:
0.9852
RIG_SCORE:
0.6701
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D27H
TCGA-DK-AA75
BLCA
TCGA
LATPMPT
DEG_SCF_FBW7_1
0.1667
p.D27H
DO219012
BLCA
ICGC
LATPMPT
DEG_SCF_FBW7_1
0.1667
p.S45L
DO222957
BTCA
ICGC
LATPMPT
DEG_SCF_FBW7_1
0.1667
p.P38H
DO228092
EOPC
ICGC
LATPMPT
DEG_SCF_FBW7_1
0.6583
p.P36T
DO228939
LICA
ICGC
LATPMPT
DEG_SCF_FBW7_1
0.7031
p.P38T
DO229031
LICA
ICGC
LATPMPT
DEG_SCF_FBW7_1
0.5919
p.P40L
SIDM01151
Hepatocellular Carcinoma
GDSC
LATPMPT
DEG_SCF_FBW7_1
0.3056
p.P40L
SIDM01025
Esophageal Squamous Cell Carcinoma
GDSC
LATPMPT
DEG_SCF_FBW7_1
0.3056
p.P40L
SIDM00164
Biliary Tract Carcinoma
GDSC
LATPMPT
DEG_SCF_FBW7_1
0.3056
p.I26V
SIDM00845
Burkitt's Lymphoma
GDSC
LATPMPT
DEG_SCF_FBW7_1
0.1389
p.I26V
SIDM01519
Head and Neck Carcinoma
GDSC
LATPMPT
DEG_SCF_FBW7_1
0.1389
p.S41L
SIDM01072
Squamous Cell Lung Carcinoma
GDSC
LATPMPT
DEG_SCF_FBW7_1
0.2778
p.S41L
ACH-000878
Lung Cancer
CCLE
LATPMPT
DEG_SCF_FBW7_1
0.2778
p.S41L
HCC-15
lung
COSMIC
LATPMPT
DEG_SCF_FBW7_1
0.2778
Drug responses associated with SBNO1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LATPMPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A3KN83
Protein strawberry notch homolog 1
DEG_SCF_FBW7_1
33:39
LATPMPT
FBXW7
0.9915
More...