DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LATPSPE
Uniprot ID:
Q96PQ1
Source protein:
Sialic acid-binding Ig-like lectin 12
Source gene:
SIGLEC12
Class:
DEG_SCF_FBW7_2
Location:
553:559
E3 ligase:
FBXW7
DEGRON score:
0.7802
ASA_SCORE:
93.7714
COIL:
0.9543
CONS_SCORE:
0.2328
DSS_SCORE:
0.7607
HELIX:
0.0284
FCONS_SCORE:
0.7063
RIG_SCORE:
0.5636
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A552T
TCGA-59-A5PD
OV
TCGA
LATPSPE
DEG_SCF_FBW7_2
0.3056
p.Q564H
TCGA-66-2763
LUSC
TCGA
LATPSPE
DEG_SCF_FBW7_2
0.1944
p.Q564K
TCGA-99-AA5R
LUAD
TCGA
LATPSPE
DEG_SCF_FBW7_2
0.1944
p.E560K
TCGA-EE-A2GC
SKCM
TCGA
LATPSPE
DEG_SCF_FBW7_2
0.3056
p.H548Q
SIDM00186
Kidney Carcinoma
GDSC
LATPSPE
DEG_SCF_FBW7_2
0.1944
p.H548Q
SIDM01651
Non-Cancerous
GDSC
LATPSPE
DEG_SCF_FBW7_2
0.1944
p.H548Q
ACH-002353
Non-Cancerous
CCLE
LATPSPE
DEG_SCF_FBW7_2
0.1944
p.P545H
SIDM00703
Non-Small Cell Lung Carcinoma
GDSC
LATPSPE
DEG_SCF_FBW7_2
0.1111
p.P545H
ACH-000929
Lung Cancer
CCLE
LATPSPE
DEG_SCF_FBW7_2
0.1111
p.P545H
NCI-H2110
lung
COSMIC
LATPSPE
DEG_SCF_FBW7_2
0.1111
p.P545T
SIDM00703
Non-Small Cell Lung Carcinoma
GDSC
LATPSPE
DEG_SCF_FBW7_2
0.1111
p.P545T
ACH-000929
Lung Cancer
CCLE
LATPSPE
DEG_SCF_FBW7_2
0.1111
p.P545T
NCI-H2110
lung
COSMIC
LATPSPE
DEG_SCF_FBW7_2
0.1111
Drug responses associated with SIGLEC12 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LATPSPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96PQ1
Sialic acid-binding Ig-like lectin 12
DEG_SCF_FBW7_2
553:559
LATPSPE
FBXW7
0.7802
More...