DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LCPHGE
Uniprot ID:
Q86UV5
Source protein:
Ubiquitin carboxyl-terminal hydrolase 48
Source gene:
USP48
Class:
LIG_APCC_ABBA_1
Location:
651:656
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5148
ASA_SCORE:
63.05
COIL:
0.7197
CONS_SCORE:
0.4459
DSS_SCORE:
0.3063
HELIX:
0.0623
FCONS_SCORE:
1.1207
RIG_SCORE:
0.7954
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V655G
DO218012
ORCA
ICGC
LCPHGE
LIG_APCC_ABBA_1
0.7532
p.P653S
TCGA-S5-A6DX
BLCA
TCGA
LCPHGE
LIG_APCC_ABBA_1
0.6752
p.P653S
DO51903
BLCA
ICGC
LCPHGE
LIG_APCC_ABBA_1
0.6752
p.P653S
DO51509
PACA
ICGC
LCPHGE
LIG_APCC_ABBA_1
0.6752
p.L651M
TCGA-B5-A11E
UCEC
TCGA
LCPHGE
LIG_APCC_ABBA_1
0.5999
p.L651M
DO41644
UCEC
ICGC
LCPHGE
LIG_APCC_ABBA_1
0.5999
p.L657V
TCGA-EO-A3B0
UCEC
TCGA
LCPHGE
LIG_APCC_ABBA_1
0.3056
p.L657V
DO219773
UCEC
ICGC
LCPHGE
LIG_APCC_ABBA_1
0.3056
p.F657L
DO234359
ESAD
ICGC
LCPHGE
LIG_APCC_ABBA_1
0.3056
p.S659F
DO229221
THCA
ICGC
LCPHGE
LIG_APCC_ABBA_1
0.25
p.F646L
DO229242
THCA
ICGC
LCPHGE
LIG_APCC_ABBA_1
0.1944
p.N645K
TCGA-UZ-A9PS
KIRP
TCGA
LCPHGE
LIG_APCC_ABBA_1
0.1667
p.N645K
DO219709
KIRP
ICGC
LCPHGE
LIG_APCC_ABBA_1
0.1667
p.E643G
DO232849
NACA
ICGC
LCPHGE
LIG_APCC_ABBA_1
0.1111
p.E641Q
SIDM00864
Cervical Carcinoma
GDSC
LCPHGE
LIG_APCC_ABBA_1
0.0556
p.E641Q
DoTc2-4510
cervix
COSMIC
LCPHGE
LIG_APCC_ABBA_1
0.0556
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Drug responses associated with USP48 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of LCPHGE
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86UV5
Ubiquitin carboxyl-terminal hydrolase 48
LIG_APCC_ABBA_1
651:656
LCPHGE
APC,CDC20,FZR1
0.5148
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